RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SDCCAG8Q86SQ7 713 aaPredicted RBP7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 DND1Q8IYX4 353 aaKnown RBP7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 OTUD6BQ8N6M0 293 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 TRPV3Q8NET8 790 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 SLC22A8Q8TCC7 542 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 ABTB1Q969K4 478 aaPredicted RBP7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 STARD4Q96DR4 205 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 MS4A6EQ96DS6 147 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 ART5Q96L15 291 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 CCDC42Q96M95 316 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 GNRHR2Q96P88 292 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 GPR21Q99679 349 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 SLCO5A1Q9H2Y9 848 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 LRTM1Q9HBL6 345 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 ABHD10Q9NUJ1 306 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 INTS10Q9NVR2 710 aaKnown RBP7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 DAPP1Q9UN19 280 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 FRG2CA6NGY1 282 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 HRKO00198 91 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 LDB3O75112 727 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 TGM6O95932 706 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 ACTL6AO96019 429 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 APRTP07741 180 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 PAMP19021 973 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 PTPN6P29350 595 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 IDUAP35475 653 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 RWDD2BP57060 319 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 RPS4XP62701 263 aaKnown RBP7□□□□□ -1.29
HERPUD1-206ENST00000563343 EEF1A1P68104 462 aaKnown RBP7□□□□□ -1.29
HERPUD1-206ENST00000563343 IGLV3-21P80748 117 aaPredicted RBP7□□□□□ -1.29
HERPUD1-206ENST00000563343 DHX9Q08211 1270 aaKnown RBP7□□□□□ -1.29
HERPUD1-206ENST00000563343 ADPRMQ3LIE5 342 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 TBCELQ5QJ74 424 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 EEF1A1P5Q5VTE0 462 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 DUPD1Q68J44 220 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 UGT3A1Q6NUS8 523 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 DGAT2L6Q6ZPD8 337 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 BTLAQ7Z6A9 289 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 MILR1Q7Z6M3 343 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 DENND6AQ8IWF6 608 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 FAM13CQ8NE31 585 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 FAM83FQ8NEG4 500 aaPredicted RBP7□□□□□ -1.29
HERPUD1-206ENST00000563343 LILRB1Q8NHL6 650 aaPredicted RBP7□□□□□ -1.29
HERPUD1-206ENST00000563343 GABPB2Q8TAK5 448 aaPredicted RBP7□□□□□ -1.29
HERPUD1-206ENST00000563343 SLC5A11Q8WWX8 675 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 ATL1Q8WXF7 558 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 ZC3HAV1LQ96H79 300 aaKnown RBP7□□□□□ -1.29
HERPUD1-206ENST00000563343 SENP5Q96HI0 755 aaPredicted RBP7□□□□□ -1.29
HERPUD1-206ENST00000563343 RILPQ96NA2 401 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 IL22Q9GZX6 179 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 ADAM19Q9H013 955 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 PARVBQ9HBI1 364 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 RAB6BQ9NRW1 208 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 SYBUQ9NX95 663 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 SOX13Q9UN79 622 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 PCDHA13Q9Y5I0 950 aa7□□□□□ -1.29
HERPUD1-206ENST00000563343 ALPK2Q86TB3 2170 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 LRIT2A6NDA9 550 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 E7EVH7 732 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 B3GALT2O43825 422 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 ADAM11O75078 769 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 NDUFS7O75251 213 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 CGAP01215 116 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 IGHV4-39P01824 125 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 CLPSP04118 112 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 C8GP07360 202 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 SOD3P08294 240 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 DANCRP0C864 163 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 POU2F1P14859 743 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 EGR1P18146 543 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 MGAT1P26572 445 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 CERS1P27544 350 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 CFPP27918 469 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 STIP1P31948 543 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 KIR2DL2P43627 348 aaPredicted RBP6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 RPL21P46778 160 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 SLC6A12P48065 614 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 NPY2RP49146 381 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 MTTPP55157 894 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 STXBP1P61764 594 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 OCRLQ01968 901 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 FUT7Q11130 342 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 SP140Q13342 867 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 SERTAD2Q14140 314 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 CSHL1Q14406 222 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 TMEM249Q2WGJ8 235 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 BEX5Q5H9J7 111 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 UBAP2Q5T6F2 1119 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 NEPROQ6NW34 567 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 NXPE4Q6UWF7 544 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 SBSNQ6UWP8 590 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 YRDCQ86U90 279 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 LUZP1Q86V48 1076 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 MEX3DQ86XN8 651 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 KLHDC8AQ8IYD2 350 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 TBC1D19Q8N5T2 526 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 ARIH2OSQ8N7S6 290 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 SPPL2AQ8TCT8 520 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 EEF1AKMT1Q8WVE0 214 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 ATG4AQ8WYN0 398 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms