RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 SRMSQ9H3Y6 488 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 CXorf36Q9H7Y0 433 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 ZNF624Q9P2J8 865 aaPredicted RBP16.84■□□□□ 0.29
SNX1-208ENST00000559844 ANGPT4Q9Y264 503 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 MAP4K5Q9Y4K4 846 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 EME2A4GXA9 379 aaPredicted RBP16.84■□□□□ 0.29
SNX1-208ENST00000559844 TRIM64A6NGJ6 449 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 hCG_2039718K7EN88 272 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 GDF9O60383 454 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 SEC24DO94855 1032 aaPredicted RBP16.84■□□□□ 0.29
SNX1-208ENST00000559844 BMP10O95393 424 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 CLIC3O95833 236 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 ARAFP10398 606 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 VLDLRP98155 873 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 CDK6Q00534 326 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 TGM3Q08188 693 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 SLC9A5Q14940 896 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 ZC3H12BQ5HYM0 836 aaKnown RBP16.84■□□□□ 0.29
SNX1-208ENST00000559844 SAXO2Q658L1 398 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 TMEM179BQ7Z7N9 219 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 OFCC1Q8IZS5 231 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 METTL25Q8N6Q8 603 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 MS4A6EQ96DS6 147 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 KCNC2Q96PR1 638 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 FAM118AQ9NWS6 357 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 PADI2Q9Y2J8 665 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 PCDHGB2Q9Y5G2 931 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 PCDHGA4Q9Y5G9 962 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 SNX8Q9Y5X2 465 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 ZNF292O60281 2723 aa16.83■□□□□ 0.29
SNX1-208ENST00000559844 KIR2DS5A0A0G2JLQ3 304 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 A0A0G2JNG1 304 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 OR5K4A6NMS3 321 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 C4orf47A7E2U8 309 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 KIR2DS3K7RE56 304 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 PAX7P23759 505 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 DSTNP60981 165 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 KCNJ10P78508 379 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 KIR2DS3Q14952 304 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 KIR2DS5Q14953 304 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 TOR1AIP1Q5JTV8 583 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 KIAA1614Q5VZ46 1190 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 FAM20CQ8IXL6 584 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 HS3ST5Q8IZT8 346 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 C8orf59Q8N0T1 100 aaPredicted RBP16.83■□□□□ 0.28
SNX1-208ENST00000559844 OR2L5Q8NG80 312 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 NFKBIDQ8NI38 313 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 SLC37A2Q8TED4 501 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 ZFPM2Q8WW38 1151 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 EXOSC8Q96B26 276 aaKnown RBP16.83■□□□□ 0.28
SNX1-208ENST00000559844 DGCR14Q96DF8 476 aaKnown RBP16.83■□□□□ 0.28
SNX1-208ENST00000559844 NEURL3Q96EH8 262 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 MBOAT4Q96T53 435 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 SOX17Q9H6I2 414 aaPredicted RBP16.83■□□□□ 0.28
SNX1-208ENST00000559844 REEP1Q9H902 201 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 TEX10Q9NXF1 929 aaPredicted RBP16.83■□□□□ 0.28
SNX1-208ENST00000559844 U3KQV3 271 aa16.83■□□□□ 0.28
SNX1-208ENST00000559844 TRIM64CA6NLI5 447 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 MYO1GB0I1T2 1018 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 ERI3O43414 337 aaKnown RBP16.82■□□□□ 0.28
SNX1-208ENST00000559844 SIGLEC6O43699 453 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 GCM2O75603 506 aaPredicted RBP16.82■□□□□ 0.28
SNX1-208ENST00000559844 AQP1P29972 269 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 MAZP56270 477 aaKnown RBP16.82■□□□□ 0.28
SNX1-208ENST00000559844 STXBP1P61764 594 aaKnown RBP16.82■□□□□ 0.28
SNX1-208ENST00000559844 RPS15AP62244 130 aaKnown RBP16.82■□□□□ 0.28
SNX1-208ENST00000559844 EEF1A2Q05639 463 aaKnown RBP16.82■□□□□ 0.28
SNX1-208ENST00000559844 HYAL2Q12891 473 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 CRB2Q5IJ48 1285 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 BORAQ6PGQ7 559 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 TRIM48Q8IWZ4 208 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 JPH3Q8WXH2 748 aaPredicted RBP16.82■□□□□ 0.28
SNX1-208ENST00000559844 C7orf34Q96L11 122 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 MUS81Q96NY9 551 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 VNN3Q9NY84 501 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 GVINP1Q7Z2Y8 2422 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 ZW10O43264 779 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 SLC19A1P41440 591 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 GRK6P43250 576 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 CRYBA2P53672 197 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 TPD52P55327 224 aaPredicted RBP16.82■□□□□ 0.28
SNX1-208ENST00000559844 IL18R1Q13478 541 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 CNPY1Q3B7I2 92 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 INAVAQ3KP66 663 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 SPDYE7PQ495Y7 208 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 IFI44LQ53G44 452 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 NDUFAF5Q5TEU4 345 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 ABHD17CQ6PCB6 329 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 OGFOD3Q6PK18 319 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 ZNF793Q6ZN11 406 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 THAP5Q7Z6K1 395 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 PAQR7Q86WK9 346 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 ZC3H7AQ8IWR0 971 aaKnown RBP16.82■□□□□ 0.28
SNX1-208ENST00000559844 SLC35F3Q8IY50 421 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 PSMA8Q8TAA3 256 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 AICDAQ9GZX7 198 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 ABCG4Q9H172 646 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 KLHL31Q9H511 634 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 SLAMF7Q9NQ25 335 aa16.82■□□□□ 0.28
SNX1-208ENST00000559844 PRDM7Q9NQW5 492 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms