RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 BMP10O95393 424 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 C8orf89P0DMQ9 161 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 COX6A1P12074 109 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 EPB42P16452 691 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 XCR1P46094 333 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 EMX2Q04743 252 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 RGS1Q08116 209 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 Q0VFX4 171 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 PWP1Q13610 501 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 CEACAM7Q14002 265 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 RPS6KA2Q15349 733 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 ATP6AP1LQ52LC2 224 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 PRR30Q53SZ7 412 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-214ENST00000554604 TCHHL1Q5QJ38 904 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-214ENST00000554604 C6orf136Q5SQH8 315 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 CATSPEREQ5SY80 951 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 BLOC1S3Q6QNY0 202 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 ISLR2Q6UXK2 745 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 LINC00696Q6ZRV3 163 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 Q6ZSR9 355 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 TMPRSS11BQ86T26 416 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 ZNF740Q8NDX6 193 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 OR9I1Q8NGQ6 314 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 OR2T11Q8NH01 316 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 CCDC124Q96CT7 223 aaKnown RBP11.7□□□□□ -0.54
SHMT2-214ENST00000554604 MAGEB10Q96LZ2 347 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-214ENST00000554604 CDK15Q96Q40 435 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 WDR77Q9BQA1 342 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-214ENST00000554604 AIF1LQ9BQI0 150 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 ZIM2Q9NZV7 527 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 SUCOQ9UBS9 1254 aaKnown RBP11.7□□□□□ -0.54
SHMT2-214ENST00000554604 GIMAP2Q9UG22 337 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 NAALAD2Q9Y3Q0 740 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 SLC22A7Q9Y694 548 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 ICE1Q9Y2F5 2266 aa11.7□□□□□ -0.54
SHMT2-214ENST00000554604 IGHV1-45A0A0A0MS14 117 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 DYTNA2CJ06 578 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 SLC28A1O00337 649 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 NR5A2O00482 541 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 CFLARO15519 480 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 RDH16O75452 317 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 JRKO75564 520 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 ICAM2P13598 275 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 GNLYP22749 145 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 ARL1P40616 181 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-214ENST00000554604 SLC6A12P48065 614 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 HTR6P50406 440 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 SNRPNP63162 240 aaKnown RBP11.69□□□□□ -0.54
SHMT2-214ENST00000554604 RBBP5Q15291 538 aaKnown RBP11.69□□□□□ -0.54
SHMT2-214ENST00000554604 SPATS1Q496A3 300 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 GGTA1PQ4G0N0 100 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 NXPE4Q6UWF7 544 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 Q6ZS92 163 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 KLHDC8AQ8IYD2 350 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 CISD2Q8N5K1 135 aaKnown RBP11.69□□□□□ -0.54
SHMT2-214ENST00000554604 TRPV3Q8NET8 790 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 DNAJB14Q8TBM8 379 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 SLC26A7Q8TE54 656 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 NRG4Q8WWG1 115 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 PPP3R2Q96LZ3 170 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 HOPXQ9BPY8 73 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-214ENST00000554604 TACO1Q9BSH4 297 aaKnown RBP11.69□□□□□ -0.54
SHMT2-214ENST00000554604 SARGQ9BW04 601 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 VN1R1Q9GZP7 353 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 PELI2Q9HAT8 420 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 SPAG4Q9NPE6 437 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 SLC52A3Q9NQ40 469 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 C19orf25Q9UFG5 118 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-214ENST00000554604 CCL27Q9Y4X3 112 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 NAV2Q8IVL1 2488 aa11.69□□□□□ -0.54
SHMT2-214ENST00000554604 LOC102723996A0A087X1L8 192 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 A0A1W2PQ72 361 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 URADA6NGE7 173 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 ZNF860A6NHJ4 632 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 LSM1O15116 133 aaKnown RBP11.68□□□□□ -0.54
SHMT2-214ENST00000554604 ANGPT2O15123 496 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 RGS14O43566 566 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 BCAS2O75934 225 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-214ENST00000554604 CLDN9O95484 217 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 SERPINA7P05543 415 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 CYC1P08574 325 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 ALOX12P18054 663 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 CAPN3P20807 821 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 AHRP35869 848 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 UQCRFS1P47985 274 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 DIO3P55073 304 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 KCNK10P57789 538 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 REEP5Q00765 189 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 TRAP1Q12931 704 aaKnown RBP11.68□□□□□ -0.54
SHMT2-214ENST00000554604 MAD2L1Q13257 205 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-214ENST00000554604 MFAP5Q13361 173 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 RCAN2Q14206 197 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 FLOT2Q14254 428 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 DEFB134Q4QY38 66 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 CRB2Q5IJ48 1285 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 SAMD4BQ5PRF9 694 aaKnown RBP11.68□□□□□ -0.54
SHMT2-214ENST00000554604 NIPAL1Q6NVV3 410 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 ZFP1Q6P2D0 407 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 TMEM205Q6UW68 189 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 ABHD13Q7L211 337 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms