RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 UTP6Q9NYH9 597 aaKnown RBP2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 ERAP1Q9NZ08 941 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 PKD2L2Q9NZM6 624 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 TMEM181Q9P2C4 612 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 KLHL8Q9P2G9 620 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 CACNG5Q9UF02 275 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 RASAL2Q9UJF2 1139 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 EXOGQ9Y2C4 368 aaKnown RBP2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 TMED5Q9Y3A6 229 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 ANKRD36CQ5JPF3 1778 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 BCORQ6W2J9 1755 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 LRP5O75197 1615 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 MYH14Q7Z406 1995 aaKnown RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 STRCP1A6NGW2 1772 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 AFDNP55196 1824 aaKnown RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 PVALEFA0A1B0GWK0 134 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 TTC26A0AVF1 554 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 ARHGEF37A1IGU5 675 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZSCAN5CA6NGD5 496 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 GOLGA6L10A6NI86 522 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 HSF2BPO75031 334 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 SMIM24O75264 130 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 FLOT1O75955 427 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 PGLSO95336 258 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 HSPA4LO95757 839 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 CGAP01215 116 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 GBAP04062 536 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 RPN1P04843 607 aaKnown RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 PABPC4LP0CB38 370 aaKnown RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 TSPY3P0CV98 308 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 TSPY8P0CW00 308 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 CPA3P15088 417 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 TCF4P15884 667 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 ELAVL4P26378 380 aaKnown RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 TMOD1P28289 359 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 HLA-FP30511 346 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 HOXC13P31276 330 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 KIF5BP33176 963 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 SFTPDP35247 375 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 NKX2-1P43699 371 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 CRKLP46109 303 aaKnown RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 CDX1P47902 265 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 SLC6A12P48065 614 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 LUMP51884 338 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 PAX9P55771 341 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 HILS1P60008 231 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 RPS8P62241 208 aaKnown RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 POU5F1Q01860 360 aaKnown RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 C2orf54Q08AI8 447 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 CBX3Q13185 183 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 TNK1Q13470 666 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 GIT2Q14161 759 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 EFTUD2Q15029 972 aaKnown RBP eCLIP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 KRT31Q15323 416 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 PPP1R7Q15435 360 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 FCN2Q15485 313 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 IL17AQ16552 155 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 HLA-BQ31612 363 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 CNPY1Q3B7I2 92 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 FAM91A1Q658Y4 838 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 KCTD16Q68DU8 428 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 NEPROQ6NW34 567 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 NOTUMQ6P988 496 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 TRAT1Q6PIZ9 186 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 PET117Q6UWS5 81 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 NCCRP1Q6ZVX7 275 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 BTN2A1Q7KYR7 527 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 FCRLAQ7L513 359 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 TRPM8Q7Z2W7 1104 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 PTAR1Q7Z6K3 402 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCDC60Q8IWA6 550 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 C4orf19Q8IY42 314 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 SYCP3Q8IZU3 236 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZNF614Q8N883 585 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 GBP7Q8N8V2 638 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCDC197Q8NCU1 140 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 OCC1Q8TAD7 63 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 ERMNQ8TAM6 284 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 DEPDC1BQ8WUY9 529 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 NSMAFQ92636 917 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 PRCCQ92733 491 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 CHMP6Q96FZ7 201 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 EPSTI1Q96J88 318 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 POM121L2Q96KW2 1035 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 LINC00479Q96M42 142 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 AK8Q96MA6 479 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCDC43Q96MW1 224 aaKnown RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 BTBD9Q96Q07 612 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 TRIM4Q9C037 500 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 CENPHQ9H3R5 247 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 FAM114A2Q9NRY5 505 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 RNF14Q9UBS8 474 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 IL36AQ9UHA7 158 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 BAIAP2L1Q9UHR4 511 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 ELF5Q9UKW6 265 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 PPP1R3CQ9UQK1 317 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 COMMD3-BMI1R4GMX3 469 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCDC88AQ3V6T2 1871 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 ABCB11O95342 1321 aa2.85□□□□□ -1.95
HMGB1P41-201ENST00000520234 TIAM2Q8IVF5 1701 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 330.2 ms