RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 STRA8Q7Z7C7 330 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 DTWD1Q8N5C7 304 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 NKAPQ8N5F7 415 aaKnown RBP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 METTL27Q8N6F8 245 aaPredicted RBP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 AMER3Q8N944 861 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 OR56A3Q8NH54 315 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 DCAKDQ8WVC6 231 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 SNRNP40Q96DI7 357 aaKnown RBP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 LINGO1Q96FE5 620 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 RMND5BQ96G75 393 aaPredicted RBP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 THOC3Q96J01 351 aaKnown RBP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 RILPQ96NA2 401 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 SLC29A3Q9BZD2 475 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 ATG10Q9H0Y0 220 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 ZBTB20Q9HC78 741 aaPredicted RBP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 DDX18Q9NVP1 670 aaKnown RBP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 ARL15Q9NXU5 204 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 SUCOQ9UBS9 1254 aaKnown RBP7.57□□□□□ -1.2
SCN1A-207ENST00000507401 POMPQ9Y244 141 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 PLLPQ9Y342 182 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 TSC22D4Q9Y3Q8 395 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 SLC22A7Q9Y694 548 aa7.57□□□□□ -1.2
SCN1A-207ENST00000507401 SPENQ96T58 3664 aaKnown RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 SHANK1Q9Y566 2161 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 USP9YO00507 2555 aaPredicted RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 USP9XQ93008 2570 aaPredicted RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 A0A0A6YYC8 382 aaPredicted RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 NSG1A0A0A6YYJ2 146 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 I3L1I5 382 aaPredicted RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 LCMT2O60294 686 aaKnown RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 PGM3O95394 542 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 HEXBP07686 556 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 COX6A1P12074 109 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 GNLYP22749 145 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 PEX2P28328 305 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 BCL6P41182 706 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 TSFMP43897 325 aaKnown RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 KRT6CP48668 564 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 PCYT1AP49585 367 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 HNMTP50135 292 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 CCR8P51685 355 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 NAA20P61599 178 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 CDKL1Q00532 357 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 Q0VFX4 171 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 MFAP5Q13361 173 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 PWP1Q13610 501 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 ESPL1Q14674 2120 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 TGFBIQ15582 683 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 PHKG1Q16816 387 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 SPATS1Q496A3 300 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 FHL5Q5TD97 284 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 KRT80Q6KB66 452 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 RPUSD3Q6P087 351 aaKnown RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 SBSNQ6UWP8 590 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 ASPGQ86U10 573 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 GPR180Q86V85 440 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 ZC3HC1Q86WB0 502 aaKnown RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 PLD3Q8IV08 490 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 NUDCD3Q8IVD9 361 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 TBC1D19Q8N5T2 526 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 MFSD9Q8NBP5 474 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 FBXO36Q8NEA4 188 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 OR51Q1Q8NH59 317 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 DNAJB14Q8TBM8 379 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 PIWIL2Q8TC59 973 aaKnown RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 SLC13A3Q8WWT9 602 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 RASSF5Q8WWW0 418 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 S100ZQ8WXG8 99 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 PSMF1Q92530 271 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 HAS2Q92819 552 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 FBXL8Q96CD0 374 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 NRBF2Q96F24 287 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 CFAP36Q96G28 342 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 DUS3LQ96G46 650 aaKnown RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 PLEKHA8Q96JA3 519 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 VPS39Q96JC1 886 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 MAGED4Q96JG8 741 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 CNDP1Q96KN2 507 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 IMMP1LQ96LU5 166 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 ZNF597Q96LX8 424 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 PWWP2AQ96N64 755 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 PSMG3-AS1Q96PY0 264 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 WDR77Q9BQA1 342 aaPredicted RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 GPATCH1Q9BRR8 931 aaKnown RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 WDR83Q9BRX9 315 aaKnown RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 MCMBPQ9BTE3 642 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 ILKAPQ9H0C8 392 aaPredicted RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 ZNF700Q9H0M5 742 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 MRPL46Q9H2W6 279 aaKnown RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 EPS8L2Q9H6S3 715 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 POPDC3Q9HBV1 291 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 ZNF160Q9HCG1 818 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 ANKHQ9HCJ1 492 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 AGPAT4Q9NRZ5 378 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 RIC8BQ9NVN3 520 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 MID2Q9UJV3 735 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 CARD8Q9Y2G2 431 aa7.56□□□□□ -1.2
SCN1A-207ENST00000507401 COPG1Q9Y678 874 aaKnown RBP7.56□□□□□ -1.2
SCN1A-207ENST00000507401 CNTRLQ7Z7A1 2325 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 IGHV1-45A0A0A0MS14 117 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms