RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 CXCL12P48061 93 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 LIM2P55344 173 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 APOFQ13790 326 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 LAPTM4AQ15012 233 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 ZIK1Q3SY52 487 aaPredicted RBP17.21■□□□□ 0.35
LINC00535-201ENST00000501400 KRT80Q6KB66 452 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 UBALD2Q8IYN6 164 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 CCDC116Q8IYX3 515 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 RERGQ96A58 199 aaPredicted RBP17.21■□□□□ 0.35
LINC00535-201ENST00000501400 TMEM19Q96HH6 336 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 SLC35G5Q96KT7 338 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 MBOAT4Q96T53 435 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 RBM4BQ9BQ04 359 aaKnown RBP17.21■□□□□ 0.35
LINC00535-201ENST00000501400 RBM4Q9BWF3 364 aaKnown RBP17.21■□□□□ 0.35
LINC00535-201ENST00000501400 RSPO3Q9BXY4 272 aaPredicted RBP17.21■□□□□ 0.35
LINC00535-201ENST00000501400 ROGDIQ9GZN7 287 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 SEMA6CQ9H3T2 930 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 ZCCHC3Q9NUD5 404 aaKnown RBP17.21■□□□□ 0.35
LINC00535-201ENST00000501400 THADAQ6YHU6 1953 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 EME2A4GXA9 379 aaPredicted RBP17.2■□□□□ 0.34
LINC00535-201ENST00000501400 URADA6NGE7 173 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 ZNF860A6NHJ4 632 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 AQP9O43315 295 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 UBXN7O94888 489 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 RECKO95980 971 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 EIF2S1P05198 315 aaKnown RBP17.2■□□□□ 0.34
LINC00535-201ENST00000501400 CTSBP07858 339 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 ALOX12P18054 663 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 OLR1P78380 273 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 MLLT1Q03111 559 aaPredicted RBP17.2■□□□□ 0.34
LINC00535-201ENST00000501400 FOXB2Q5VYV0 432 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 REEP3Q6NUK4 255 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 SLC36A4Q6YBV0 504 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 ABHD13Q7L211 337 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 HIPK1Q86Z02 1210 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 SLC30A8Q8IWU4 369 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 OR5D16Q8NGK9 328 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 SFXN5Q8TD22 340 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 DNASE2BQ8WZ79 361 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 RDH12Q96NR8 316 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 TOR3AQ9H497 397 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 NDUFAF4Q9P032 175 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 DAPP1Q9UN19 280 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 SIT1Q9Y3P8 196 aa17.2■□□□□ 0.34
LINC00535-201ENST00000501400 LILRA5A6NI73 299 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 H0YAE9 185 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 ZSCAN9O15535 394 aaPredicted RBP17.19■□□□□ 0.34
LINC00535-201ENST00000501400 DPM1O60762 260 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 SDC3O75056 442 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 ALBP02768 609 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 CSNK2A2P19784 350 aaPredicted RBP17.19■□□□□ 0.34
LINC00535-201ENST00000501400 CAPZBP47756 277 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 CSNK1EP49674 416 aaKnown RBP17.19■□□□□ 0.34
LINC00535-201ENST00000501400 DEFB110Q30KQ9 67 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 TMEM107Q6UX40 140 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 SZRD1Q7Z422 152 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 CSNK1A1LQ8N752 337 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 C19orf47Q8N9M1 422 aaKnown RBP17.19■□□□□ 0.34
LINC00535-201ENST00000501400 OR9A2Q8NGT5 310 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 OR51I1Q9H343 314 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 UCK1Q9HA47 277 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 UCKL1Q9NWZ5 548 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 IFT80Q9P2H3 777 aaPredicted RBP17.19■□□□□ 0.34
LINC00535-201ENST00000501400 PHF11Q9UIL8 331 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 CACNA1IQ9P0X4 2223 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 LMO7DNF2Z398 122 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 H3BNH8 94 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 B3GALT2O43825 422 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 FPR1P21462 350 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 PIGAP37287 484 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 BUD31P41223 144 aaPredicted RBP17.19■□□□□ 0.34
LINC00535-201ENST00000501400 VSX2P58304 361 aaPredicted RBP17.19■□□□□ 0.34
LINC00535-201ENST00000501400 LTB4RQ15722 352 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 DEFB133Q30KQ1 61 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 CYP27C1Q4G0S4 372 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 IFI44LQ53G44 452 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 ARMC6Q6NXE6 501 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 PATL1Q86TB9 770 aaKnown RBP17.19■□□□□ 0.34
LINC00535-201ENST00000501400 ARHGEF39Q8N4T4 335 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 SMYD1Q8NB12 490 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 SPPL2AQ8TCT8 520 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 MAGED4Q96JG8 741 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 AMBRA1Q9C0C7 1298 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 SEMA3GQ9NS98 782 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 MUTYHQ9UIF7 546 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 RAB23Q9ULC3 237 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 DOLKQ9UPQ8 538 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 SCN2AQ99250 2005 aa17.19■□□□□ 0.34
LINC00535-201ENST00000501400 PGM3O95394 542 aa17.18■□□□□ 0.34
LINC00535-201ENST00000501400 H6PDO95479 791 aa17.18■□□□□ 0.34
LINC00535-201ENST00000501400 OR12D1P0DN82 309 aa17.18■□□□□ 0.34
LINC00535-201ENST00000501400 CPN2P22792 545 aa17.18■□□□□ 0.34
LINC00535-201ENST00000501400 DNAJA1P31689 397 aaKnown RBP17.18■□□□□ 0.34
LINC00535-201ENST00000501400 MC3RP41968 323 aa17.18■□□□□ 0.34
LINC00535-201ENST00000501400 OR1E2P47887 323 aa17.18■□□□□ 0.34
LINC00535-201ENST00000501400 HNRNPKP61978 463 aaKnown RBP eCLIP17.18■□□□□ 0.34
LINC00535-201ENST00000501400 SIM2Q14190 667 aaPredicted RBP17.18■□□□□ 0.34
LINC00535-201ENST00000501400 RNF220Q5VTB9 566 aa17.18■□□□□ 0.34
LINC00535-201ENST00000501400 AVL9Q8NBF6 648 aa17.18■□□□□ 0.34
LINC00535-201ENST00000501400 APOBEC4Q8WW27 367 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms