RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SNX6Q9UNH7 406 aa11.41□□□□□ -0.58
MSH5-216ENST00000484309 ERVK-11Q9UQG0 969 aa11.41□□□□□ -0.58
MSH5-216ENST00000484309 TIMM22Q9Y584 194 aa11.41□□□□□ -0.58
MSH5-216ENST00000484309 DNAJC13O75165 2243 aa11.41□□□□□ -0.58
MSH5-216ENST00000484309 SYNDIG1LA6NDD5 238 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 NPIPA5E9PKD4 350 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 COPEO14579 308 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 ZNHIT1O43257 154 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 LRRTM2O43300 516 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 OR10H2O60403 315 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 PLIN3O60664 434 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 ZNF354AO60765 605 aaPredicted RBP11.4□□□□□ -0.58
MSH5-216ENST00000484309 OR6B1O95007 311 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 SLU7O95391 586 aaKnown RBP11.4□□□□□ -0.58
MSH5-216ENST00000484309 GPR75O95800 540 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 TRHRP34981 398 aaPredicted RBP11.4□□□□□ -0.58
MSH5-216ENST00000484309 PTGER1P34995 402 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 SOX3P41225 446 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 MEOX1P50221 254 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 GPR85P60893 370 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 ERVK-8P63133 956 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 RNF4P78317 190 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 ALDH6A1Q02252 535 aaKnown RBP11.4□□□□□ -0.58
MSH5-216ENST00000484309 GALNT1Q10472 559 aaPredicted RBP11.4□□□□□ -0.58
MSH5-216ENST00000484309 ZNF267Q14586 743 aaPredicted RBP11.4□□□□□ -0.58
MSH5-216ENST00000484309 OR52E8Q6IFG1 317 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 IL20RBQ6UXL0 311 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 ZYG11AQ6WRX3 759 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 TDRPQ86YL5 185 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 ARMC10Q8N2F6 343 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 C1orf52Q8N6N3 182 aaKnown RBP11.4□□□□□ -0.58
MSH5-216ENST00000484309 FAM98AQ8NCA5 519 aaKnown RBP11.4□□□□□ -0.58
MSH5-216ENST00000484309 DNAJB8Q8NHS0 232 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 METTL6Q8TCB7 284 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 ASB15Q8WXK1 588 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 TMEM125Q96AQ2 219 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 RBM18Q96H35 190 aaKnown RBP11.4□□□□□ -0.58
MSH5-216ENST00000484309 SENP5Q96HI0 755 aaPredicted RBP11.4□□□□□ -0.58
MSH5-216ENST00000484309 FRMD6Q96NE9 622 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 PSMG3-AS1Q96PY0 264 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 RASL10BQ96S79 203 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 MID1IP1Q9NPA3 183 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 AHSPQ9NZD4 102 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 MYOTQ9UBF9 498 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 NPIPA1Q9UND3 350 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 ERVK-19Q9WJR5 959 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 SLC5A6Q9Y289 635 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 YARS2Q9Y2Z4 477 aaKnown RBP11.4□□□□□ -0.58
MSH5-216ENST00000484309 PCDHGB6Q9Y5F9 930 aa11.4□□□□□ -0.58
MSH5-216ENST00000484309 ASPDHA6ND91 283 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 A8MVJ9 347 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 G3V3Y1 287 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 UBFD1O14562 309 aaKnown RBP11.39□□□□□ -0.59
MSH5-216ENST00000484309 ZNF500O60304 480 aaPredicted RBP11.39□□□□□ -0.59
MSH5-216ENST00000484309 CDH16O75309 829 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 LDLRP01130 860 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 KRT6AP02538 564 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 KRT6BP04259 564 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 KRT4P19013 534 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 PIK3R1P27986 724 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 KRT6CP48668 564 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 MAPK12P53778 367 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 FOXA1P55317 472 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 HSF1Q00613 529 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 TBL3Q12788 808 aaKnown RBP11.39□□□□□ -0.59
MSH5-216ENST00000484309 ASPHQ12797 758 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 LCP2Q13094 533 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 ZNF750Q32MQ0 723 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 C4orf17Q53FE4 359 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 RNFT1Q5M7Z0 435 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 C10orf62Q5T681 223 aaPredicted RBP11.39□□□□□ -0.59
MSH5-216ENST00000484309 NDUFAF5Q5TEU4 345 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 PAGE2Q7Z2X7 111 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 FJX1Q86VR8 437 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 SULF2Q8IWU5 870 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 C9orf40Q8IXQ3 194 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 ST13P4Q8IZP2 240 aaPredicted RBP11.39□□□□□ -0.59
MSH5-216ENST00000484309 MYRIPQ8NFW9 859 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 AGAP11Q8TF27 550 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 AENQ8WTP8 325 aaKnown RBP11.39□□□□□ -0.59
MSH5-216ENST00000484309 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.39□□□□□ -0.59
MSH5-216ENST00000484309 GAL3ST4Q96RP7 486 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 SHCBP1LQ9BZQ2 653 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 TRIM45Q9H8W5 580 aaPredicted RBP11.39□□□□□ -0.59
MSH5-216ENST00000484309 PPCSQ9HAB8 311 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 BRF2Q9HAW0 419 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 HPF1Q9NWY4 346 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 ADAM29Q9UKF5 820 aa11.39□□□□□ -0.59
MSH5-216ENST00000484309 TRGV8A0A0C4DH27 118 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 A0A0G2JMM0 328 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 A0A1W2PPB8 328 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 A0A1W2PRS3 328 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 KIR3DP1A8MWS1 328 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 DYRK3O43781 588 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 PEX1O43933 1283 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 ULK1O75385 1050 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 MLYCDO95822 493 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 IGKV3-11P04433 115 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 CT62P0C5K7 136 aa11.38□□□□□ -0.59
MSH5-216ENST00000484309 ZNF24P17028 368 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms