RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CNIH4Q9P003 139 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 GRIP1Q9Y3R0 1128 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 A0A0C4DFX4 3053 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 HMX3A6NHT5 357 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 PRMT3O60678 531 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 SCO1O75880 301 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 LRG1P02750 347 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 RHCEP18577 417 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 CPN2P22792 545 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 CRYBA2P53672 197 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 TAS2R41P59536 307 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 ZNF630Q2M218 657 aaPredicted RBP12.1□□□□□ -0.47
VPS52-218ENST00000482399 ZNF614Q8N883 585 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 C16orf78Q8WTQ4 265 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 REPS1Q96D71 796 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 C11orf24Q96F05 449 aaPredicted RBP12.1□□□□□ -0.47
VPS52-218ENST00000482399 OR4K3Q96R72 315 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 SPRTNQ9H040 489 aaPredicted RBP12.1□□□□□ -0.47
VPS52-218ENST00000482399 TXNL4BQ9NX01 149 aaKnown RBP12.1□□□□□ -0.47
VPS52-218ENST00000482399 RGS17Q9UGC6 210 aaPredicted RBP12.1□□□□□ -0.47
VPS52-218ENST00000482399 SLC45A1Q9Y2W3 748 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 CENPBD1B2RD01 187 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 I3L521 148 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 CAPN5O15484 640 aaPredicted RBP12.1□□□□□ -0.47
VPS52-218ENST00000482399 ALDH1A1P00352 501 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 ADRA2AP08913 450 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 CD9P21926 228 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 RFX2P48378 723 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 SLC35F1Q5T1Q4 408 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 ZNF730Q6ZMV8 503 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 UXS1Q8NBZ7 420 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 ZNF461Q8TAF7 563 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 FBLIM1Q8WUP2 373 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 AP3S1Q92572 193 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 UFD1Q92890 307 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 CCDC120Q96HB5 630 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 TEFMQ96QE5 360 aaKnown RBP12.1□□□□□ -0.47
VPS52-218ENST00000482399 SERHL2Q9H4I8 314 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 CXXC1Q9P0U4 656 aaPredicted RBP12.1□□□□□ -0.47
VPS52-218ENST00000482399 SATB2Q9UPW6 733 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 MAU2Q9Y6X3 613 aa12.1□□□□□ -0.47
VPS52-218ENST00000482399 POP4O95707 220 aaKnown RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 CRYZL1O95825 349 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 OSMP13725 252 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 ZNF8P17098 575 aaPredicted RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 IL1RNP18510 177 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 CTBP2P56545 445 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 TMEM115Q12893 351 aaPredicted RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 MTAPQ13126 283 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 SEC23BQ15437 767 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 WDR53Q7Z5U6 358 aaPredicted RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 PHC2Q8IXK0 858 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 HORMAD2Q8N7B1 307 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 DNAJC5GQ8N7S2 189 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 OR4K5Q8NGD3 323 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 RAET1EQ8TD07 263 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 ZNF607Q96SK3 696 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 KLF16Q9BXK1 252 aaPredicted RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 EGLN3Q9H6Z9 239 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 ASIC5Q9NY37 505 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 BTNL2Q9UIR0 455 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 NDRG2Q9UN36 371 aaKnown RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 TSC2P49815 1807 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 PCM1Q15154 2024 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 MKI67P46013 3256 aaKnown RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 CPSF4LA6NMK7 179 aaKnown RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 INMT-MINDY4F8WBC2 141 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 PRKYO43930 277 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 ICMTO60725 284 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 LEFTY1O75610 366 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 HBQ1P09105 142 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 C1SP09871 688 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 CSF3P09919 207 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 HMGA1P17096 107 aaKnown RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 PAICSP22234 425 aaKnown RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 PTX3P26022 381 aaPredicted RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 PPM1FP49593 454 aaPredicted RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 PSPHP78330 225 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 LASP1Q14847 261 aaKnown RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 P2RY14Q15391 338 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 SYPL1Q16563 259 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 FLYWCH1Q4VC44 716 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 FAM20CQ8IXL6 584 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 OR8J1Q8NGP2 316 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 NEIL3Q8TAT5 605 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 UBTD2Q8WUN7 234 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 TTLL2Q9BWV7 592 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 ALG5Q9Y673 324 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 B4DXG7 233 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 MRPS14O60783 128 aaKnown RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 GCM2O75603 506 aaPredicted RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 SCG5P05408 212 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 EPHX1P07099 455 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 IMPA1P29218 277 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 KIR2DL3P43628 341 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 GPR1P46091 355 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 GPR50Q13585 617 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 BCL2L15Q5TBC7 163 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 GDPD4Q6W3E5 623 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 LRRC17Q8N6Y2 441 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms