RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ZNF721Q8TF20 911 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 AGAP11Q8TF27 550 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 ART5Q96L15 291 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 KCNA7Q96RP8 456 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 CNPPD1Q9BV87 410 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 IQCGQ9H095 443 aaKnown RBP22.33■■□□□ 1.17
CPNE1-223ENST00000475146 TRIM45Q9H8W5 580 aaPredicted RBP22.33■■□□□ 1.17
CPNE1-223ENST00000475146 MYOTQ9UBF9 498 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 VPS29Q9UBQ0 182 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 MID2Q9UJV3 735 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 YARS2Q9Y2Z4 477 aaKnown RBP22.33■■□□□ 1.17
CPNE1-223ENST00000475146 TIMM22Q9Y584 194 aa22.33■■□□□ 1.17
CPNE1-223ENST00000475146 CCDC151A5D8V7 595 aa22.32■■□□□ 1.16
CPNE1-223ENST00000475146 WWP2O00308 870 aa22.32■■□□□ 1.16
CPNE1-223ENST00000475146 PGRMC2O15173 223 aa22.32■■□□□ 1.16
CPNE1-223ENST00000475146 GUCY1B2O75343 617 aa22.32■■□□□ 1.16
CPNE1-223ENST00000475146 OR2J2O76002 312 aa22.32■■□□□ 1.16
CPNE1-223ENST00000475146 ESRRBO95718 433 aa22.32■■□□□ 1.16
CPNE1-223ENST00000475146 TDGF1P3P51864 188 aa22.32■■□□□ 1.16
CPNE1-223ENST00000475146 TBL3Q12788 808 aaKnown RBP22.32■■□□□ 1.16
CPNE1-223ENST00000475146 DGAT2L6Q6ZPD8 337 aa22.32■■□□□ 1.16
CPNE1-223ENST00000475146 CYP4Z2PQ8N1L4 340 aa22.32■■□□□ 1.16
CPNE1-223ENST00000475146 SENP5Q96HI0 755 aaPredicted RBP22.32■■□□□ 1.16
CPNE1-223ENST00000475146 APOPT1Q96IL0 206 aa22.32■■□□□ 1.16
CPNE1-223ENST00000475146 PARD6BQ9BYG5 372 aa22.32■■□□□ 1.16
CPNE1-223ENST00000475146 SVILO95425 2214 aa22.32■■□□□ 1.16
CPNE1-223ENST00000475146 NME2P1O60361 137 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 CRCPO75575 148 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 CHN1P15882 459 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 NME2P22392 152 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 MST1P26927 711 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 PIK3R1P27986 724 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 HK2P52789 917 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 DNAJB13P59910 316 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 NAA20P61599 178 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 ERVK-8P63133 956 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 RNF4P78317 190 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 ZNF227Q86WZ6 799 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 SRRM1Q8IYB3 904 aaKnown RBP22.31■■□□□ 1.16
CPNE1-223ENST00000475146 OR5L2Q8NGL0 311 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 OR8K3Q8NH51 312 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 ASB15Q8WXK1 588 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 RIT1Q92963 219 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 FBXL20Q96IG2 436 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 ACPTQ9BZG2 426 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 OXSMQ9NWU1 459 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 LGALS13Q9UHV8 139 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 ERVK-11Q9UQG0 969 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 ERVK-19Q9WJR5 959 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 OSGIN2Q9Y236 505 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 DOPEY2Q9Y3R5 2298 aa22.31■■□□□ 1.16
CPNE1-223ENST00000475146 TMEM200CA6NKL6 621 aa22.3■■□□□ 1.16
CPNE1-223ENST00000475146 A8MVJ9 347 aa22.3■■□□□ 1.16
CPNE1-223ENST00000475146 UBFD1O14562 309 aaKnown RBP22.3■■□□□ 1.16
CPNE1-223ENST00000475146 KCNK10P57789 538 aa22.3■■□□□ 1.16
CPNE1-223ENST00000475146 ZNF267Q14586 743 aaPredicted RBP22.3■■□□□ 1.16
CPNE1-223ENST00000475146 SCIMPQ6UWF3 145 aa22.3■■□□□ 1.16
CPNE1-223ENST00000475146 GFRALQ6UXV0 394 aa22.3■■□□□ 1.16
CPNE1-223ENST00000475146 FRMD7Q6ZUT3 714 aa22.3■■□□□ 1.16
CPNE1-223ENST00000475146 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.3■■□□□ 1.16
CPNE1-223ENST00000475146 TRABD2AQ86V40 505 aa22.3■■□□□ 1.16
CPNE1-223ENST00000475146 GBP7Q8N8V2 638 aaPredicted RBP22.3■■□□□ 1.16
CPNE1-223ENST00000475146 OR4K14Q8NGD5 310 aa22.3■■□□□ 1.16
CPNE1-223ENST00000475146 FRMD6Q96NE9 622 aa22.3■■□□□ 1.16
CPNE1-223ENST00000475146 RASL10BQ96S79 203 aa22.3■■□□□ 1.16
CPNE1-223ENST00000475146 ROPN1BQ9BZX4 212 aaPredicted RBP22.3■■□□□ 1.16
CPNE1-223ENST00000475146 ROPN1Q9HAT0 212 aaPredicted RBP22.3■■□□□ 1.16
CPNE1-223ENST00000475146 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.3■■□□□ 1.16
CPNE1-223ENST00000475146 HPF1Q9NWY4 346 aa22.3■■□□□ 1.16
CPNE1-223ENST00000475146 MKS1Q9NXB0 559 aa22.3■■□□□ 1.16
CPNE1-223ENST00000475146 KLF13Q9Y2Y9 288 aaPredicted RBP22.3■■□□□ 1.16
CPNE1-223ENST00000475146 A0A1W2PS29 197 aa22.29■■□□□ 1.16
CPNE1-223ENST00000475146 ASPDHA6ND91 283 aa22.29■■□□□ 1.16
CPNE1-223ENST00000475146 HRKO00198 91 aa22.29■■□□□ 1.16
CPNE1-223ENST00000475146 IGKV3-11P04433 115 aa22.29■■□□□ 1.16
CPNE1-223ENST00000475146 SLC35E2P0CK97 266 aa22.29■■□□□ 1.16
CPNE1-223ENST00000475146 HMGCS1Q01581 520 aa22.29■■□□□ 1.16
CPNE1-223ENST00000475146 ALDH6A1Q02252 535 aaKnown RBP22.29■■□□□ 1.16
CPNE1-223ENST00000475146 SPRED3Q2MJR0 410 aa22.29■■□□□ 1.16
CPNE1-223ENST00000475146 LIPMQ5VYY2 423 aa22.29■■□□□ 1.16
CPNE1-223ENST00000475146 GPALPP1Q8IXQ4 340 aa22.29■■□□□ 1.16
CPNE1-223ENST00000475146 SSC4DQ8WTU2 575 aa22.29■■□□□ 1.16
CPNE1-223ENST00000475146 CHTF18Q8WVB6 975 aa22.29■■□□□ 1.16
CPNE1-223ENST00000475146 SEC14L3Q9UDX4 400 aa22.29■■□□□ 1.16
CPNE1-223ENST00000475146 SLC5A6Q9Y289 635 aa22.29■■□□□ 1.16
CPNE1-223ENST00000475146 PCDHA9Q9Y5H5 950 aa22.29■■□□□ 1.16
CPNE1-223ENST00000475146 RELNP78509 3460 aa22.29■■□□□ 1.16
CPNE1-223ENST00000475146 C1orf226A1L170 272 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 H3BQF6 201 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 OR6B1O95007 311 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 UNC5CO95185 931 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 DEKP35659 375 aaKnown RBP22.28■■□□□ 1.16
CPNE1-223ENST00000475146 SOX3P41225 446 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 FOXA1P55317 472 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 ACSM2AQ08AH3 577 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 C6orf163Q5TEZ5 329 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 ACSM2BQ68CK6 577 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 IL20RBQ6UXL0 311 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 C10orf107Q8IVU9 208 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 C9orf40Q8IXQ3 194 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms