RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 MICU2Q8IYU8 434 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 FAM181AQ8N9Y4 354 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 TTC29Q8NA56 475 aaPredicted RBP8.46□□□□□ -1.06
VPS50-207ENST00000458530 CATSPER1Q8NEC5 780 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 OR8K5Q8NH50 307 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 OR10A6Q8NH74 314 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 UTP15Q8TED0 518 aaKnown RBP8.46□□□□□ -1.06
VPS50-207ENST00000458530 NCLNQ969V3 563 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 MOAP1Q96BY2 351 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 DUS3LQ96G46 650 aaKnown RBP8.46□□□□□ -1.06
VPS50-207ENST00000458530 BBS4Q96RK4 519 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 INPP5KQ9BT40 448 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 VCXQ9H320 206 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 KLHL31Q9H511 634 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 KAT8Q9H7Z6 458 aaKnown RBP8.46□□□□□ -1.06
VPS50-207ENST00000458530 TPT1P8Q9HAU6 139 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 FANCEQ9HB96 536 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 ANKHQ9HCJ1 492 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 LHX9Q9NQ69 397 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 SEMA3GQ9NS98 782 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 THUMPD1Q9NXG2 353 aaKnown RBP8.46□□□□□ -1.06
VPS50-207ENST00000458530 SLC25A37Q9NYZ2 338 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 SLAMF8Q9P0V8 285 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 UTS2RQ9UKP6 389 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 PACSIN3Q9UKS6 424 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 PADI4Q9UM07 663 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 PLCL2Q9UPR0 1127 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 ZNF780BQ9Y6R6 833 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 RNF215Q9Y6U7 377 aa8.46□□□□□ -1.06
VPS50-207ENST00000458530 MN1Q10571 1320 aaPredicted RBP8.46□□□□□ -1.06
VPS50-207ENST00000458530 UNC13CQ8NB66 2214 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 IGHV1OR21-1A0A087WYE8 117 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 A0A0G2JN53 185 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 DHRS12A0PJE2 317 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 TMEM247A6NEH6 219 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 SLC9B1P1A6NJY1 282 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 TOX3O15405 576 aaPredicted RBP8.45□□□□□ -1.06
VPS50-207ENST00000458530 SORBS2O94875 1100 aaKnown RBP8.45□□□□□ -1.06
VPS50-207ENST00000458530 SLITRK5O94991 958 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 BMP10O95393 424 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 C6orf47O95873 294 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 EIF2S1P05198 315 aaKnown RBP8.45□□□□□ -1.06
VPS50-207ENST00000458530 GSNP06396 782 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 ABCB1P08183 1280 aaPredicted RBP8.45□□□□□ -1.06
VPS50-207ENST00000458530 PVRP15151 417 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 GPX2P18283 190 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 GGT1P19440 569 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 CPN2P22792 545 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 PTPN6P29350 595 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 PPP2R1BP30154 601 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 SLC7A1P30825 629 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 GPC1P35052 558 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 VHLP40337 213 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 FRKP42685 505 aaPredicted RBP8.45□□□□□ -1.06
VPS50-207ENST00000458530 CDKN2CP42773 168 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 LSSP48449 732 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 MS4A2Q01362 244 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 MC1RQ01726 317 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 BNIP3Q12983 259 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 CLPPQ16740 277 aaPredicted RBP8.45□□□□□ -1.06
VPS50-207ENST00000458530 HLA-BQ31612 363 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 SPDYE7PQ495Y7 208 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 ZNF385BQ569K4 471 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 INTS11Q5TA45 600 aaKnown RBP8.45□□□□□ -1.06
VPS50-207ENST00000458530 CPZQ66K79 652 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 GLYATQ6IB77 296 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 TMEM214Q6NUQ4 689 aaKnown RBP8.45□□□□□ -1.06
VPS50-207ENST00000458530 WDR74Q6RFH5 385 aaPredicted RBP8.45□□□□□ -1.06
VPS50-207ENST00000458530 ANGPTL8Q6UXH0 198 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 ZNF793Q6ZN11 406 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 FAM92BQ6ZTR7 304 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 PRSS42Q7Z5A4 293 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 MARCH9Q86YJ5 346 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 MCATQ8IVS2 390 aaKnown RBP8.45□□□□□ -1.06
VPS50-207ENST00000458530 SFTPA2Q8IWL1 248 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 MSRB3Q8IXL7 192 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 CLECL1Q8IZS7 167 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 EID3Q8N140 333 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 GALNT15Q8N3T1 639 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 SLC25A45Q8N413 288 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 KCT2Q8NC54 265 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 FAM156AQ8NDB6 213 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 C7orf57Q8NEG2 295 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 OR52E4Q8NGH9 312 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 ZCCHC10Q8TBK6 192 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 SFXN5Q8TD22 340 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 SAP25Q8TEE9 199 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 PYDC1Q8WXC3 89 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 NCSTNQ92542 709 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 FAM162AQ96A26 154 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 EXOSC8Q96B26 276 aaKnown RBP8.45□□□□□ -1.06
VPS50-207ENST00000458530 MIEF2Q96C03 454 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 RNF145Q96MT1 663 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 TGM7Q96PF1 710 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 MAP3K3Q99759 626 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 SLC35A5Q9BS91 424 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 UGT2B28Q9BY64 529 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 KLHL25Q9H0H3 589 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 PCDHAC1Q9H158 963 aa8.45□□□□□ -1.06
VPS50-207ENST00000458530 GAREM1Q9H706 876 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms