RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 PRDM6Q9NQX0 595 aa15.24■□□□□ 0.03
AP000253.1-201ENST00000449339 EHD3Q9NZN3 535 aa15.24■□□□□ 0.03
AP000253.1-201ENST00000449339 APOBEC3BQ9UH17 382 aaKnown RBP15.24■□□□□ 0.03
AP000253.1-201ENST00000449339 NDRG4Q9ULP0 352 aaKnown RBP15.24■□□□□ 0.03
AP000253.1-201ENST00000449339 PCDHGA4Q9Y5G9 962 aa15.24■□□□□ 0.03
AP000253.1-201ENST00000449339 GMPPBQ9Y5P6 360 aa15.24■□□□□ 0.03
AP000253.1-201ENST00000449339 GSAPA4D1B5 854 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 C5orf58C9J3I9 102 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 SH3BP5O60239 455 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 PRAMEF10O60809 474 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 VIPP01282 170 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 BCHEP06276 602 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 HIST1H1TP22492 207 aaPredicted RBP15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 MAOBP27338 520 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 RAB8AP61006 207 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 SNRPNP63162 240 aaKnown RBP15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 DYNC1I2Q13409 638 aaKnown RBP15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 MLC1Q15049 377 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 TJAP1Q5JTD0 557 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 GPR107Q5VW38 600 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 ABCA7Q8IZY2 2146 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 MFSD9Q8NBP5 474 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 OR2L5Q8NG80 312 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 PSMA8Q8TAA3 256 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 RNF217Q8TC41 542 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 C12orf43Q96C57 262 aaKnown RBP15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 KLHDC7BQ96G42 594 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 OR2A14Q96R47 310 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 FAIM2Q9BWQ8 316 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 A4GALTQ9NPC4 353 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 CPNE7Q9UBL6 633 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 SNX7Q9UNH6 387 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 HSPE1-MOB4S4R3N1 261 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 GLOD5A6NK44 160 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 TOR1BO14657 336 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 ZW10O43264 779 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 ANGPTL1O95841 491 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 HTR1AP08908 422 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 CCDC159P0C7I6 412 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 UGT2B7P16662 529 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 JUNBP17275 347 aaPredicted RBP15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 MAGP20916 626 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 CCT3P49368 545 aaKnown RBP15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 SPIBQ01892 262 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 NPRL3Q12980 569 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 SLAMF1Q13291 335 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 TP53BP2Q13625 1128 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 SLC44A2Q8IWA5 706 aaPredicted RBP15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 ACOT4Q8N9L9 421 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 OR52J3Q8NH60 311 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 ZNF420Q8TAQ5 688 aaPredicted RBP15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 SLC37A2Q8TED4 501 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 GIPC3Q8TF64 312 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 RAB8BQ92930 207 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 ZNF566Q969W8 418 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 GUCD1Q96NT3 240 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 APOL4Q9BPW4 351 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 GSDMCQ9BYG8 508 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 SLC35C2Q9NQQ7 365 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 PRDM7Q9NQW5 492 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 GPR27Q9NS67 375 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 ZNF451Q9Y4E5 1061 aa15.23■□□□□ 0.03
AP000253.1-201ENST00000449339 PTGES3LE9PB15 166 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 HMGN4O00479 90 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 WNT1P04628 370 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 TFPTP0C1Z6 253 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 CTSEP14091 401 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 DCKP27707 260 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 CDH12P55289 794 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 PIGFQ07326 219 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 DUSP7Q16829 419 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 RPS26P11Q5JNZ5 115 aaPredicted RBP15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 VN1R4Q7Z5H5 301 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 TSPYL5Q86VY4 417 aaPredicted RBP15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 OR13F1Q8NGS4 319 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 TMEM19Q96HH6 336 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 AMDHD1Q96NU7 426 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 FEVQ99581 238 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 GLIPR2Q9H4G4 154 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 MRPS17Q9Y2R5 130 aaKnown RBP15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 ATG4BQ9Y4P1 393 aa15.22■□□□□ 0.03
AP000253.1-201ENST00000449339 XPNPEP2O43895 674 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 ZNF217O75362 1048 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 DNAJB5O75953 348 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 ATP5A1P25705 553 aaKnown RBP15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 CERS1P27544 350 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 KCT2Q8NC54 265 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 PAK1IP1Q9NWT1 392 aaPredicted RBP15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 ACTR10Q9NZ32 417 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 ASB4Q9Y574 426 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 J3KTA2 159 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 CTSVO60911 334 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 NDUFS2O75306 463 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 PVRP15151 417 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 PTGER1P34995 402 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 GPC1P35052 558 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 XCR1P46094 333 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 ARFIP1P53367 373 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 STARD6P59095 220 aa15.21■□□□□ 0.03
AP000253.1-201ENST00000449339 UBE2IP63279 158 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms