RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 SENP5Q96HI0 755 aaPredicted RBP10.42□□□□□ -0.74
RFFL-204ENST00000414419 ZNF382Q96SR6 550 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 CNPPD1Q9BV87 410 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 IQCGQ9H095 443 aaKnown RBP10.42□□□□□ -0.74
RFFL-204ENST00000414419 TRIM45Q9H8W5 580 aaPredicted RBP10.42□□□□□ -0.74
RFFL-204ENST00000414419 LIN28AQ9H9Z2 209 aaKnown RBP10.42□□□□□ -0.74
RFFL-204ENST00000414419 TIMMDC1Q9NPL8 285 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 FARSBQ9NSD9 589 aaKnown RBP10.42□□□□□ -0.74
RFFL-204ENST00000414419 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.42□□□□□ -0.74
RFFL-204ENST00000414419 HPF1Q9NWY4 346 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 VPS29Q9UBQ0 182 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 ERRFI1Q9UJM3 462 aaPredicted RBP10.42□□□□□ -0.74
RFFL-204ENST00000414419 SPTAN1Q13813 2472 aaKnown RBP10.42□□□□□ -0.74
RFFL-204ENST00000414419 A0A1B0GUH1 482 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 FOXO6A8MYZ6 492 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 MANBAO00462 879 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 LRRTM2O43300 516 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 PRKNO60260 465 aaPredicted RBP10.41□□□□□ -0.74
RFFL-204ENST00000414419 ZNF500O60304 480 aaPredicted RBP10.41□□□□□ -0.74
RFFL-204ENST00000414419 CRCPO75575 148 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 ENO1P06733 434 aaKnown RBP10.41□□□□□ -0.74
RFFL-204ENST00000414419 HSD3B1P14060 373 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 KRT4P19013 534 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 HSD3B2P26439 372 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 MST1P26927 711 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 DEKP35659 375 aaKnown RBP10.41□□□□□ -0.74
RFFL-204ENST00000414419 TDGF1P3P51864 188 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 HK2P52789 917 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 CASP6P55212 293 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 KCNK10P57789 538 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 VSNL1P62760 191 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 SRSF11Q05519 484 aaKnown RBP10.41□□□□□ -0.74
RFFL-204ENST00000414419 ZNF267Q14586 743 aaPredicted RBP10.41□□□□□ -0.74
RFFL-204ENST00000414419 C4orf17Q53FE4 359 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 KRTCAP3Q53RY4 240 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 NDUFAF5Q5TEU4 345 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 C6orf163Q5TEZ5 329 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 OPN5Q6U736 354 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 IL20RBQ6UXL0 311 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 ZYG11AQ6WRX3 759 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 SLC29A4Q7RTT9 530 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 COMMD6Q7Z4G1 85 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 GPALPP1Q8IXQ4 340 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 RIBC1Q8N443 379 aaPredicted RBP10.41□□□□□ -0.74
RFFL-204ENST00000414419 ZNF321PQ8N8H1 164 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 POGLUT1Q8NBL1 392 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 OR4K14Q8NGD5 310 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 RDH11Q8TC12 318 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 ZNF721Q8TF20 911 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 HBEGFQ99075 208 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 MID1IP1Q9NPA3 183 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 TEX10Q9NXF1 929 aaPredicted RBP10.41□□□□□ -0.74
RFFL-204ENST00000414419 MID2Q9UJV3 735 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 ZNF225Q9UK10 706 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 PSME2Q9UL46 239 aa10.41□□□□□ -0.74
RFFL-204ENST00000414419 USP9YO00507 2555 aaPredicted RBP10.4□□□□□ -0.74
RFFL-204ENST00000414419 NINQ8N4C6 2090 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 TRGV8A0A0C4DH27 118 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 C1orf226A1L170 272 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 ASPDHA6ND91 283 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 TMEM200CA6NKL6 621 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 WASHC1A8K0Z3 465 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 NPIPA5E9PKD4 350 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 G3V2L1 256 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 H3BQF6 201 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 PGRMC2O15173 223 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 ESRRBO95718 433 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 PROCP04070 461 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 SLC35E2P0CK97 266 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 CPA3P15088 417 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 ZNF24P17028 368 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 MEOX1P50221 254 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 XKP51811 444 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 ERVK-8P63133 956 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 CSTF3Q12996 717 aaKnown RBP10.4□□□□□ -0.74
RFFL-204ENST00000414419 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.4□□□□□ -0.74
RFFL-204ENST00000414419 TCHHL1Q5QJ38 904 aaPredicted RBP10.4□□□□□ -0.74
RFFL-204ENST00000414419 EMBQ6PCB8 327 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 RNF111Q6ZNA4 994 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 C16orf47Q6ZP98 133 aaPredicted RBP10.4□□□□□ -0.74
RFFL-204ENST00000414419 ZNF227Q86WZ6 799 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 C4orf33Q8N1A6 199 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 CPSF7Q8N684 471 aaKnown RBP10.4□□□□□ -0.74
RFFL-204ENST00000414419 C1orf52Q8N6N3 182 aaKnown RBP10.4□□□□□ -0.74
RFFL-204ENST00000414419 GBP7Q8N8V2 638 aaPredicted RBP10.4□□□□□ -0.74
RFFL-204ENST00000414419 OR2W6PQ8NHA6 318 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 SLC22A8Q8TCC7 542 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 FBXL20Q96IG2 436 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 FRMD6Q96NE9 622 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 PSMG3-AS1Q96PY0 264 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 RASL10BQ96S79 203 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 FAIM2Q9BWQ8 316 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 TSPAN10Q9H1Z9 355 aaPredicted RBP10.4□□□□□ -0.74
RFFL-204ENST00000414419 EMCNQ9ULC0 261 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 NPIPA1Q9UND3 350 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 ERVK-19Q9WJR5 959 aa10.4□□□□□ -0.74
RFFL-204ENST00000414419 GNG14A0A1W2PPG7 69 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 GOLGA6L10A6NI86 522 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 TFECO14948 347 aaPredicted RBP10.39□□□□□ -0.75
RFFL-204ENST00000414419 PEX1O43933 1283 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms