RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 PGRMC2O15173 223 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 KRT38O76015 456 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 GPR75O95800 540 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 AIFM1O95831 613 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 COX7A2P14406 83 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 ALOX15P16050 662 aaPredicted RBP16.93■□□□□ 0.3
FXN-203ENST00000396366 TSPAN8P19075 237 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 GCAP28676 217 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 TLX1P31314 330 aaPredicted RBP16.93■□□□□ 0.3
FXN-203ENST00000396366 PTGS2P35354 604 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 CCNG1P51959 295 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 SMSP52788 366 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 ARFIP1P53367 373 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 PPIAP62937 165 aaKnown RBP16.93■□□□□ 0.3
FXN-203ENST00000396366 PHEXP78562 749 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 TRAF3Q13114 568 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 ZNF267Q14586 743 aaPredicted RBP16.93■□□□□ 0.3
FXN-203ENST00000396366 GLE1Q53GS7 698 aaKnown RBP16.93■□□□□ 0.3
FXN-203ENST00000396366 PIGGQ5H8A4 983 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 METTL2BQ6P1Q9 378 aaKnown RBP16.93■□□□□ 0.3
FXN-203ENST00000396366 CYP20A1Q6UW02 462 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 RTL4Q6ZR62 310 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 TICAM1Q8IUC6 712 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 FAM57AQ8TBR7 257 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 DMRTA2Q96SC8 542 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 CNPPD1Q9BV87 410 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 FARSBQ9NSD9 589 aaKnown RBP16.93■□□□□ 0.3
FXN-203ENST00000396366 PSD3Q9NYI0 1048 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 NFU1Q9UMS0 254 aa16.93■□□□□ 0.3
FXN-203ENST00000396366 A0A087WUV0 522 aaPredicted RBP16.92■□□□□ 0.3
FXN-203ENST00000396366 STX16-NPEPL1H3BU86 382 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 STX16O14662 325 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 SMIM24O75264 130 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 TPOP07202 933 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 CCL3P10147 92 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 NR2F6P10588 404 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 COL6A2P12110 1019 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 CNR1P21554 472 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 BUD31P41223 144 aaPredicted RBP16.92■□□□□ 0.3
FXN-203ENST00000396366 DNASE1L1P49184 302 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 CDH13P55290 713 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 HERVK_113P63132 956 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 ERVK-8P63133 956 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 PLGLB1Q02325 96 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 LYPD8Q6UX82 237 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 CD163Q86VB7 1156 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 NUDT13Q86X67 352 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 MCEMP1Q8IX19 187 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 OR4F6Q8NGB9 312 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 FBXL20Q96IG2 436 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 NTMT1Q9BV86 223 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 ERVK-6Q9BXR3 956 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 TTTY12Q9BZ98 90 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 PLSCR2Q9NRY7 297 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 LYARQ9NX58 379 aaKnown RBP16.92■□□□□ 0.3
FXN-203ENST00000396366 TEX10Q9NXF1 929 aaPredicted RBP16.92■□□□□ 0.3
FXN-203ENST00000396366 ZNF180Q9UJW8 692 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 ERVK-19Q9WJR5 959 aa16.92■□□□□ 0.3
FXN-203ENST00000396366 E9PLN8 166 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 GLSO94925 669 aaPredicted RBP16.91■□□□□ 0.3
FXN-203ENST00000396366 NADKO95544 446 aaPredicted RBP16.91■□□□□ 0.3
FXN-203ENST00000396366 CLPSP04118 112 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 KLK1P06870 262 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 PLIN5Q00G26 463 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 MPEG1Q2M385 716 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 TSNAXIP1Q2TAA8 658 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 EMC4Q5J8M3 183 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 FRG2Q64ET8 278 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 TTC19Q6DKK2 380 aaPredicted RBP16.91■□□□□ 0.3
FXN-203ENST00000396366 OPN5Q6U736 354 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 TAOK1Q7L7X3 1001 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 MILR1Q7Z6M3 343 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 ST13P4Q8IZP2 240 aaPredicted RBP16.91■□□□□ 0.3
FXN-203ENST00000396366 MARVELD2Q8N4S9 558 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 RIT1Q92963 219 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 FRG2BQ96QU4 278 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 SERPINI1Q99574 410 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 VKORC1Q9BQB6 163 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 MRPL57Q9BQC6 102 aaKnown RBP16.91■□□□□ 0.3
FXN-203ENST00000396366 MRPL1Q9BYD6 325 aaKnown RBP16.91■□□□□ 0.3
FXN-203ENST00000396366 MRPL46Q9H2W6 279 aaKnown RBP16.91■□□□□ 0.3
FXN-203ENST00000396366 TMCO1Q9UM00 188 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 PPT2Q9UMR5 302 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 LIPGQ9Y5X9 500 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 TACC2O95359 2948 aa16.91■□□□□ 0.3
FXN-203ENST00000396366 PKDREJQ9NTG1 2253 aa16.9■□□□□ 0.3
FXN-203ENST00000396366 A8MT66 165 aa16.9■□□□□ 0.3
FXN-203ENST00000396366 OR10H2O60403 315 aa16.9■□□□□ 0.3
FXN-203ENST00000396366 CLDN14O95500 239 aa16.9■□□□□ 0.3
FXN-203ENST00000396366 SNRPAP09012 282 aaKnown RBP16.9■□□□□ 0.3
FXN-203ENST00000396366 CELA3AP09093 270 aa16.9■□□□□ 0.3
FXN-203ENST00000396366 AGAP20933 346 aa16.9■□□□□ 0.3
FXN-203ENST00000396366 CNTFP26441 200 aa16.9■□□□□ 0.3
FXN-203ENST00000396366 PIGAP37287 484 aa16.9■□□□□ 0.3
FXN-203ENST00000396366 BIKQ13323 160 aa16.9■□□□□ 0.3
FXN-203ENST00000396366 ZNF791Q3KP31 576 aaPredicted RBP16.9■□□□□ 0.3
FXN-203ENST00000396366 TEX35Q5T0J7 233 aa16.9■□□□□ 0.3
FXN-203ENST00000396366 FAM47EQ6ZV65 393 aa16.9■□□□□ 0.3
FXN-203ENST00000396366 RPRMLQ8N4K4 120 aa16.9■□□□□ 0.3
FXN-203ENST00000396366 NUBPLQ8TB37 319 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms