RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 ASPGQ86U10 573 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 MTDHQ86UE4 582 aaKnown RBP12.89□□□□□ -0.35
PRPF18-202ENST00000378572 KRT78Q8N1N4 520 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 FITM2Q8N6M3 262 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 GBP7Q8N8V2 638 aaPredicted RBP12.89□□□□□ -0.35
PRPF18-202ENST00000378572 SELENOMQ8WWX9 145 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 PPP1R36Q96LQ0 422 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 AIF1LQ9BQI0 150 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 RNF32Q9H0A6 362 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 AKTIPQ9H8T0 292 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 BRF2Q9HAW0 419 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 KLHL1Q9NR64 748 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 ANKRD10Q9NXR5 420 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 ZNF490Q9ULM2 529 aaPredicted RBP12.89□□□□□ -0.35
PRPF18-202ENST00000378572 CCL27Q9Y4X3 112 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 FCHO1O14526 889 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 RGS14O43566 566 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 SLC35G6P0C7Q6 338 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 LINC00032P0C843 101 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 LBPP18428 481 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 ADSLP30566 484 aaPredicted RBP12.88□□□□□ -0.35
PRPF18-202ENST00000378572 ST13P50502 369 aaKnown RBP12.88□□□□□ -0.35
PRPF18-202ENST00000378572 REEP5Q00765 189 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 RELAQ04206 551 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 FAM219BQ5XKK7 198 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 ZNF324BQ6AW86 544 aaPredicted RBP12.88□□□□□ -0.35
PRPF18-202ENST00000378572 VN1R4Q7Z5H5 301 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 TICAM1Q8IUC6 712 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 BEST3Q8N1M1 668 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 OR7G3Q8NG95 312 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 TUBGCP3Q96CW5 907 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 METTL2AQ96IZ6 378 aaKnown RBP12.88□□□□□ -0.35
PRPF18-202ENST00000378572 MAGED4Q96JG8 741 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 ZNF354BQ96LW1 612 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 PPP3R2Q96LZ3 170 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 SARGQ9BW04 601 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 NMUR2Q9GZQ4 415 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 ADGRE2Q9UHX3 823 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 ZFP69BQ9UJL9 534 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 PTGDR2Q9Y5Y4 395 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 OR2W5A6NFC9 320 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 E9PBE3 544 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 SLC22A2O15244 555 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 RSL1D1O76021 490 aaKnown RBP12.88□□□□□ -0.35
PRPF18-202ENST00000378572 PDYNP01213 254 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 SNRPB2P08579 225 aaKnown RBP12.88□□□□□ -0.35
PRPF18-202ENST00000378572 ESRRAP11474 423 aaPredicted RBP12.88□□□□□ -0.35
PRPF18-202ENST00000378572 MST1P26927 711 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 GSTM2P28161 218 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 SERPINB1P30740 379 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 BCL6P41182 706 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 PIK3CBP42338 1070 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 EFNA3P52797 238 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 SNRPNP63162 240 aaKnown RBP12.88□□□□□ -0.35
PRPF18-202ENST00000378572 CSNK1G2P78368 415 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 OC90Q02509 493 aaPredicted RBP12.88□□□□□ -0.35
PRPF18-202ENST00000378572 NXNQ6DKJ4 435 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 MTFR2Q6P444 385 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 TMIGD1Q6UXZ0 262 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 ANKRD37Q7Z713 158 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 CLNKQ7Z7G1 428 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 MCEMP1Q8IX19 187 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 ARHGEF39Q8N4T4 335 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 KCT2Q8NC54 265 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 OR2T11Q8NH01 316 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 DNAJB8Q8NHS0 232 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 SLC13A3Q8WWT9 602 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 RELTQ969Z4 430 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 THAP11Q96EK4 314 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 PEX11GQ96HA9 241 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 IMMP1LQ96LU5 166 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 UTP23Q9BRU9 249 aaKnown RBP12.88□□□□□ -0.35
PRPF18-202ENST00000378572 ZNF385DQ9H6B1 395 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 SAR1AQ9NR31 198 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 FARSBQ9NSD9 589 aaKnown RBP12.88□□□□□ -0.35
PRPF18-202ENST00000378572 NAALAD2Q9Y3Q0 740 aa12.88□□□□□ -0.35
PRPF18-202ENST00000378572 ATP6AP2A0A1C7CYW4 349 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 FOXE1O00358 373 aaPredicted RBP12.87□□□□□ -0.35
PRPF18-202ENST00000378572 LSM1O15116 133 aaKnown RBP12.87□□□□□ -0.35
PRPF18-202ENST00000378572 NDUFS4O43181 175 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 ATP6AP2O75787 350 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 MRPL19P49406 292 aaKnown RBP12.87□□□□□ -0.35
PRPF18-202ENST00000378572 ATP4BP51164 291 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 TAS2R50P59544 299 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 EXT1Q16394 746 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 IMPG1Q17R60 797 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 ATP6AP1LQ52LC2 224 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 SFT2D3Q587I9 215 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 ACER2Q5QJU3 275 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 PLAG1Q6DJT9 500 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 TMEM214Q6NUQ4 689 aaKnown RBP12.87□□□□□ -0.35
PRPF18-202ENST00000378572 PAPD4Q6PIY7 484 aaKnown RBP12.87□□□□□ -0.35
PRPF18-202ENST00000378572 SCIMPQ6UWF3 145 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 SPATA19Q7Z5L4 167 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 MRGPRGQ86SM5 289 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 TBC1D19Q8N5T2 526 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 CPSF7Q8N684 471 aaKnown RBP12.87□□□□□ -0.35
PRPF18-202ENST00000378572 ERP27Q96DN0 273 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 CCDC120Q96HB5 630 aa12.87□□□□□ -0.35
PRPF18-202ENST00000378572 TSPAN10Q9H1Z9 355 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms