RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 SERHL2Q9H4I8 314 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 LYRM4Q9HD34 91 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 SAMHD1Q9Y3Z3 626 aaKnown RBP13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 LOC105369274A0A096LPK9 316 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 LOC102723532A0A0G2JNH3 316 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 GLOD5A6NK44 160 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 WASHC1A8K0Z3 465 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 C5orf58C9J3I9 102 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 ADAMDEC1O15204 470 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 B3GALT2O43825 422 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 PRKRAO75569 313 aaKnown RBP13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 PGM3O95394 542 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 GPC1P35052 558 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 BUD31P41223 144 aaPredicted RBP13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 RPS6KA3P51812 740 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 ZIK1Q3SY52 487 aaPredicted RBP13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 FAHD1Q6P587 224 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 TNFAIP8L2Q6P589 184 aaPredicted RBP13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 KLHL35Q6PF15 583 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 GKN2Q86XP6 184 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 OR4N4Q8N0Y3 316 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 ZNF555Q8NEP9 628 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 SPPL2AQ8TCT8 520 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 TMEM19Q96HH6 336 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 ZNF300Q96RE9 604 aaPredicted RBP13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 AMBRA1Q9C0C7 1298 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 SOX17Q9H6I2 414 aaPredicted RBP13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 TBC1D17Q9HA65 648 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 ZCCHC3Q9NUD5 404 aaKnown RBP13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 ORC6Q9Y5N6 252 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 U3KQV3 271 aa13.51□□□□□ -0.25
RTFDC1-201ENST00000023939 LILRA5A6NI73 299 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 HS6ST1O60243 411 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 JRKO75564 520 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 ERAL1O75616 437 aaKnown RBP13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 DNAJB5O75953 348 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 BMP10O95393 424 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 CLIC3O95833 236 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 OPN1SWP03999 348 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 FHP07954 510 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 ALOX12P18054 663 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 PRKACGP22612 351 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 KHKP50053 298 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 RPS26P62854 115 aaKnown RBP13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 KCNC4Q03721 635 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 KCNAB2Q13303 367 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 TP53BP2Q13625 1128 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 PRAMEF8Q5VWM4 474 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 PRAMEF7Q5VXH5 474 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 FRMPD2BQ6IN97 320 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 ARMC6Q6NXE6 501 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 THAP5Q7Z6K1 395 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 CYP4Z1Q86W10 505 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 ZNF786Q8N393 782 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 ADAMTS16Q8TE57 1224 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 APOBEC4Q8WW27 367 aaKnown RBP13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 GUCD1Q96NT3 240 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 MUS81Q96NY9 551 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 BCL2L10Q9HD36 194 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 NTMQ9P121 344 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 P2RX2Q9UBL9 471 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 RAB23Q9ULC3 237 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 DAPP1Q9UN19 280 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 SLC22A7Q9Y694 548 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 ZNF780BQ9Y6R6 833 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 A0A087WXM4 84 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 A0A1B0GTW7 788 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 MYOCOSA0A1B0GUC4 107 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 TMEM247A6NEH6 219 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 PRAMEF25A6NGN4 478 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 A8MVJ9 347 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 B4DGG1 531 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 EMC8O43402 210 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 DIRAS1O95057 198 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 MFN2O95140 757 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 BCHEP06276 602 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 PVRP15151 417 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 NELFEP18615 380 aaKnown RBP13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 CD247P20963 164 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 IGFBP5P24593 272 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 TLX1P31314 330 aaPredicted RBP13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 XCR1P46094 333 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 PXNP49023 591 aaPredicted RBP13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 LIM2P55344 173 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 NXPH1P58417 271 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 PRR5P85299 388 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 RPL6Q02878 288 aaKnown RBP13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 DUSP2Q05923 314 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 PPP1R8Q12972 351 aaKnown RBP13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 RUNX2Q13950 521 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 ANKRD34AQ69YU3 496 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 GPR153Q6NV75 609 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 UBALD2Q8IYN6 164 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 CCDC116Q8IYX3 515 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 OFCC1Q8IZS5 231 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 C8orf59Q8N0T1 100 aaPredicted RBP13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 ARL14Q8N4G2 192 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 PIK3C3Q8NEB9 887 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 OR4C15Q8NGM1 316 aa13.5□□□□□ -0.25
RTFDC1-201ENST00000023939 RASSF5Q8WWW0 418 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms