RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 RASGEF1AQ8N9B8 481 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 Q8NA96 180 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 HMGCLL1Q8TB92 370 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 AGR3Q8TD06 166 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 SLC41A2Q96JW4 573 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 UBXN10Q96LJ8 280 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 LYSMD1Q96S90 227 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 GPR87Q9BY21 358 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 NUF2Q9BZD4 464 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 SRMSQ9H3Y6 488 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CIDEBQ9UHD4 219 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ITGB1BP2Q9UKP3 347 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 COPG1Q9Y678 874 aaKnown RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 OR5K3A6NET4 321 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 A8MT66 165 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 TMEM233B4DJY2 109 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 PEX12O00623 359 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ALPPP05187 535 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CA5AP35218 305 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ERFP50548 548 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 GALNT1Q10472 559 aaPredicted RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 SFT2D3Q587I9 215 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 TCHHL1Q5QJ38 904 aaPredicted RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 OGFRL1Q5TC84 451 aaPredicted RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 RNF220Q5VTB9 566 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 TMEM198Q66K66 360 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 C16orf89Q6UX73 402 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CILP2Q8IUL8 1156 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 TMEM151BQ8IW70 566 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 RBMXL3Q8N7X1 1067 aaKnown RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 OR1L3Q8NH93 324 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 ASB15Q8WXK1 588 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 HOXB13Q92826 284 aaPredicted RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CCDC124Q96CT7 223 aaKnown RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 DCUN1D1Q96GG9 259 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CCDC138Q96M89 665 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 JMJD8Q96S16 334 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CDADC1Q9BWV3 514 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 POFUT1Q9H488 388 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 MEAF6Q9HAF1 191 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 MAGEE1Q9HCI5 957 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 TNFRSF12AQ9NP84 129 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 DHCR7Q9UBM7 475 aaKnown RBP4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CRLS1Q9UJA2 301 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 CSPG4Q6UVK1 2322 aa4.6□□□□□ -1.67
LINC00550-201ENST00000629293 LOC285095A0A1B0GVY8 99 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 C22orf46C9J442 243 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 ZNF749O43361 778 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 ZG16O60844 167 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 LYNP07948 512 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 LTA4HP09960 611 aaKnown RBP4.59□□□□□ -1.67
LINC00550-201ENST00000629293 MSL3P1P0C860 447 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 MTHFD1P11586 935 aaKnown RBP4.59□□□□□ -1.67
LINC00550-201ENST00000629293 ST6GAL1P15907 406 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 SAT1P21673 171 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 SPAM1P38567 509 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 SLC26A3P40879 764 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 NUDT2P50583 147 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 RRADP55042 308 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 CYLC2Q14093 348 aaPredicted RBP4.59□□□□□ -1.67
LINC00550-201ENST00000629293 CYP2A13Q16696 494 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 ZRANB3Q5FWF4 1079 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 CYHR1Q6ZMK1 362 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 BEND4Q6ZU67 534 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 TICAM1Q8IUC6 712 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 C2orf73Q8N5S3 287 aaPredicted RBP4.59□□□□□ -1.67
LINC00550-201ENST00000629293 CALML6Q8TD86 181 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 SLC26A7Q8TE54 656 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 ZNF501Q96CX3 271 aaPredicted RBP4.59□□□□□ -1.67
LINC00550-201ENST00000629293 RCN3Q96D15 328 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 CCDC126Q96EE4 140 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 FAR2Q96K12 515 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 VCXQ9H320 206 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 ASB8Q9H765 288 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 ZBTB20Q9HC78 741 aaPredicted RBP4.59□□□□□ -1.67
LINC00550-201ENST00000629293 EPHA6Q9UF33 1036 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 SERTAD3Q9UJW9 196 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 OSGIN2Q9Y236 505 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 B3GNT3Q9Y2A9 372 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 TDRKHQ9Y2W6 561 aaKnown RBP4.59□□□□□ -1.67
LINC00550-201ENST00000629293 ARL5AQ9Y689 179 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 DOCK10Q96BY6 2186 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 FER1L5A0AVI2 2057 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 A0A1B0GVC2 190 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 TRPC5OSA6NMA1 111 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 LRRTM2O43300 516 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 BAG2O95816 211 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 MPIG6BO95866 241 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 F10P00742 488 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 TIAL1Q01085 375 aaKnown RBP eCLIP4.59□□□□□ -1.67
LINC00550-201ENST00000629293 ILF2Q12905 390 aaKnown RBP4.59□□□□□ -1.67
LINC00550-201ENST00000629293 CEACAM7Q14002 265 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 PDCD2Q16342 344 aaPredicted RBP4.59□□□□□ -1.67
LINC00550-201ENST00000629293 PLEKHS1Q5SXH7 462 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 HECTD2Q5U5R9 776 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 LPCAT4Q643R3 524 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 TMEM207Q6UWW9 146 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 FJX1Q86VR8 437 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 GALNT16Q8N428 558 aa4.59□□□□□ -1.67
LINC00550-201ENST00000629293 SPATA6LQ8N4H0 392 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms