RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 KCNMB4Q86W47 210 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 CARM1Q86X55 608 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 ELMOD2Q8IZ81 293 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 PARP8Q8N3A8 854 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 METTL4Q8N3J2 472 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 Q8NBF4 154 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 GTF3AQ92664 365 aaKnown RBP3.41□□□□□ -1.86
CDR1-202ENST00000625883 ESAMQ96AP7 390 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 LGMNQ99538 433 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 SIRPDQ9H106 197 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 KCNK13Q9HB14 408 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 SPASTQ9UBP0 616 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 FAM153AQ9UHL3 310 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 ODF2LQ9ULJ1 636 aa3.41□□□□□ -1.86
CDR1-202ENST00000625883 TRBV5-4A0A0C4DH59 114 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 RNF103-CHMP3A0A140T963 221 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 BICDL2A1A5D9 508 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 KRT87PA6NCN2 255 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 CFAP73A6NFT4 308 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 EEF2KO00418 725 aaKnown RBP3.4□□□□□ -1.87
CDR1-202ENST00000625883 SOCS3O14543 225 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 TRAFD1O14545 582 aaPredicted RBP3.4□□□□□ -1.87
CDR1-202ENST00000625883 TFECO14948 347 aaPredicted RBP3.4□□□□□ -1.87
CDR1-202ENST00000625883 ZNF749O43361 778 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 IDH3BO43837 385 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 KIAA0513O60268 411 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 OR6A2O95222 327 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 PGK2P07205 417 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 FHP07954 510 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 UGT1A4P22310 534 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 MARCKSP29966 332 aaPredicted RBP3.4□□□□□ -1.87
CDR1-202ENST00000625883 MTIF2P46199 727 aaKnown RBP3.4□□□□□ -1.87
CDR1-202ENST00000625883 GPAT3Q53EU6 434 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 Q6ZRG5 221 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 ADGRD2Q7Z7M1 963 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 KRTAP7-1Q8IUC3 87 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 HDDC3Q8N4P3 179 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 RELL2Q8NC24 303 aaPredicted RBP3.4□□□□□ -1.87
CDR1-202ENST00000625883 GOLGA5Q8TBA6 731 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 SSC4DQ8WTU2 575 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 P3H4Q92791 437 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 MOCOSQ96EN8 888 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 CDHR1Q96JP9 859 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 RPGRIP1Q96KN7 1286 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 LINC00479Q96M42 142 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 RUNDC3BQ96NL0 473 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 ALKBH3Q96Q83 286 aaPredicted RBP3.4□□□□□ -1.87
CDR1-202ENST00000625883 TAAR6Q96RI8 345 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 SPAG8Q99932 426 aaPredicted RBP3.4□□□□□ -1.87
CDR1-202ENST00000625883 MCRIP2Q9BUT9 160 aaKnown RBP3.4□□□□□ -1.87
CDR1-202ENST00000625883 HSD3B7Q9H2F3 369 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 GDF3Q9NR23 364 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 NUDT4Q9NZJ9 180 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 COPS7AQ9UBW8 275 aa3.4□□□□□ -1.87
CDR1-202ENST00000625883 PIN4Q9Y237 131 aaKnown RBP3.4□□□□□ -1.87
CDR1-202ENST00000625883 FGD5Q6ZNL6 1462 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 IGHV4-30-2A0A087WSY4 118 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 TMEM89A2RUT3 159 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 YJEFN3A6XGL0 299 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 ZNF724A8MTY0 619 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 EPM2AB3EWF7 344 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 NME2P1O60361 137 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 ANXA9O76027 345 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 REC8O95072 547 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 ETS1P14921 441 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 CD1DP15813 335 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 IL10P22301 178 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 ALDH3B1P43353 468 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 ATXN3P54252 364 aaPredicted RBP3.39□□□□□ -1.87
CDR1-202ENST00000625883 NLRP11P59045 1033 aaKnown RBP3.39□□□□□ -1.87
CDR1-202ENST00000625883 RPS27AP62979 156 aaKnown RBP3.39□□□□□ -1.87
CDR1-202ENST00000625883 GAMTQ14353 236 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 SLC17A1Q14916 467 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 P2RY14Q15391 338 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 RTL6Q6ICC9 239 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 OR6B2Q6IFH4 312 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 CDC42EP5Q6NZY7 148 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 ZNF497Q6ZNH5 498 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 MCM10Q7L590 875 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 BNIPLQ7Z465 357 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 SLC22A16Q86VW1 577 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 TBC1D10CQ8IV04 446 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 PNPLA2Q96AD5 504 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 C18orf12Q96KH6 178 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 NMUR1Q9HB89 426 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 ERRFI1Q9UJM3 462 aaPredicted RBP3.39□□□□□ -1.87
CDR1-202ENST00000625883 CCPG1Q9ULG6 757 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 NUDCQ9Y266 331 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 RNF215Q9Y6U7 377 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 KIF26BQ2KJY2 2108 aa3.39□□□□□ -1.87
CDR1-202ENST00000625883 LOC390937A0A1W2PQ73 354 aa3.38□□□□□ -1.87
CDR1-202ENST00000625883 ARHGAP42A6NI28 874 aa3.38□□□□□ -1.87
CDR1-202ENST00000625883 ARHGEF33A8MVX0 844 aa3.38□□□□□ -1.87
CDR1-202ENST00000625883 K7EQG2 157 aa3.38□□□□□ -1.87
CDR1-202ENST00000625883 FBP2O00757 339 aa3.38□□□□□ -1.87
CDR1-202ENST00000625883 CHEK1O14757 476 aa3.38□□□□□ -1.87
CDR1-202ENST00000625883 PRPSAP2O60256 369 aa3.38□□□□□ -1.87
CDR1-202ENST00000625883 DPEP1P16444 411 aa3.38□□□□□ -1.87
CDR1-202ENST00000625883 MAPK3P27361 379 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms