RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 ZFP36L2P47974 494 aaKnown RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 NUMBP49757 651 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 HNRNPFP52597 415 aaKnown RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 KCNK10P57789 538 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 HILS1P60008 231 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 GSTO1P78417 241 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 HTD2P86397 168 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 FKBP3Q00688 224 aaKnown RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 RBBP4Q09028 425 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 FCHO2Q0JRZ9 810 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 HSPA14Q0VDF9 509 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 PPP1R8Q12972 351 aaKnown RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 MEF2DQ14814 521 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 SPHARQ15513 63 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 FAM189A2Q15884 450 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 CARTPTQ16568 116 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 CCDC40Q4G0X9 1142 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 HSP90AA5PQ58FG0 334 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 CT45A2Q5DJT8 189 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 LDLRAP1Q5SW96 308 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 LYPLAL1Q5VWZ2 237 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 SEL1L3Q68CR1 1132 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 UNC5DQ6UXZ4 953 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 GDPGP1Q6ZNW5 385 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 C17orf107Q6ZR85 190 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 C1orf186Q6ZWK4 172 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 Q71RC1 249 aaPredicted RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 MCM10Q7L590 875 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 C5orf24Q7Z6I8 188 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 FAM131BQ86XD5 332 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 LAX1Q8IWV1 398 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 DND1Q8IYX4 353 aaKnown RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 ELMOD2Q8IZ81 293 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 BATF2Q8N1L9 274 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 FBXW8Q8N3Y1 598 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 ARL6IP6Q8N6S5 226 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 SIDT2Q8NBJ9 832 aaKnown RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 ICA1LQ8NDH6 482 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 CNNM3Q8NE01 707 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 TMEM185AQ8NFB2 350 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 SPATA18Q8TC71 538 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 RASL10AQ92737 203 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 SLC35C1Q96A29 364 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 ESAMQ96AP7 390 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 DTD2Q96FN9 168 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 ATXN7L3BQ96GX2 97 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 NSMCE2Q96MF7 247 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 PRICKLE1Q96MT3 831 aaPredicted RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 NEDD4LQ96PU5 975 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 ALKBH3Q96Q83 286 aaPredicted RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 IWS1Q96ST2 819 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 MYCBPQ99417 103 aaPredicted RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 S1PR3Q99500 378 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 DDX50Q9BQ39 737 aaKnown RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 PIGQQ9BRB3 760 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 ZNF577Q9BSK1 485 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 CHCHD5Q9BSY4 110 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 TEX13AQ9BXU3 409 aaPredicted RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 DDX47Q9H0S4 455 aaKnown RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 PNNQ9H307 717 aaKnown RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 TMEM245Q9H330 911 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 FNDC4Q9H6D8 234 aaPredicted RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 NGBQ9NPG2 151 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 FAM212BQ9NTI7 297 aaPredicted RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 TAS2R3Q9NYW6 316 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 THYN1Q9P016 225 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 TBK1Q9UHD2 729 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 PSORS1C1Q9UIG5 152 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 TRMT6Q9UJA5 497 aaKnown RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 CCPG1Q9ULG6 757 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 AURKCQ9UQB9 309 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 FOXA2Q9Y261 457 aaPredicted RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 TMED7Q9Y3B3 224 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 MRPS18CQ9Y3D5 142 aaKnown RBP2.12□□□□□ -2.07
COPS3-213ENST00000577210 ETV7Q9Y603 341 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 AP1M2Q9Y6Q5 423 aa2.12□□□□□ -2.07
COPS3-213ENST00000577210 IGHV3OR16-10A0A075B7F0 116 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 TRBV2A0A0J9YWF9 115 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 SERINC4A6NH21 518 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 ARHGAP42A6NI28 874 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 A8MXK9 166 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 LMO7DNF2Z398 122 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 MPHOSPH10O00566 681 aaKnown RBP2.11□□□□□ -2.07
COPS3-213ENST00000577210 NDC80O14777 642 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 CHUKO15111 745 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 P2RX6O15547 441 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 KIAA0513O60268 411 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 CSDE1O75534 798 aaKnown RBP2.11□□□□□ -2.07
COPS3-213ENST00000577210 DIRAS3O95661 229 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 POP4O95707 220 aaKnown RBP2.11□□□□□ -2.07
COPS3-213ENST00000577210 CXCL14O95715 111 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 LYNP07948 512 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 NUDT17P0C025 328 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 FAM200BP0CF97 657 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 ZSCAN5DPP0CG00 497 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 NCF1P14598 390 aaPredicted RBP2.11□□□□□ -2.07
COPS3-213ENST00000577210 AREGP15514 252 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 OXTRP30559 389 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 CHRNA3P32297 505 aa2.11□□□□□ -2.07
COPS3-213ENST00000577210 PITPNBP48739 271 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms