RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 TUBA1CQ9BQE3 449 aa7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 ANP32EQ9BTT0 268 aa7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 NPLQ9BXD5 320 aaPredicted RBP7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 AMBRA1Q9C0C7 1298 aa7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 OR8D2Q9GZM6 311 aa7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 NAT10Q9H0A0 1025 aaKnown RBP7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 CXorf56Q9H5V9 222 aa7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 TMEM160Q9NX00 188 aa7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 PSD3Q9NYI0 1048 aa7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 CLCF1Q9UBD9 225 aa7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 FETUBQ9UGM5 382 aa7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 PACSIN3Q9UKS6 424 aa7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 TFR2Q9UP52 801 aa7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 ZNF148Q9UQR1 794 aa7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 DTX4Q9Y2E6 619 aa7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 DHRS7Q9Y394 339 aa7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 CLCA3PQ9Y6N3 262 aa7.03□□□□□ -1.28
HERPUD1-206ENST00000563343 PCNX3Q9H6A9 2034 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 TCRBV7S2A1N4TA0A589 114 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 ANKRD33BA6NCL7 494 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 SYNDIG1LA6NDD5 238 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 URADA6NGE7 173 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 EIF3FO00303 357 aaPredicted RBP7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 MSTNO14793 375 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 KLF4O43474 513 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 GPRIN2O60269 458 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 CTNSO60931 367 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 TBX6O95947 436 aaPredicted RBP7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 IGKV3-11P04433 115 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 SERPINA6P08185 405 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 FBXO45P0C2W1 286 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 CPN1P15169 458 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 HNRNPH1P31943 449 aaKnown RBP7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 UGT2B10P36537 528 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 ACVR1BP36896 505 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 CD79BP40259 229 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 CTBP1Q13363 440 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 RCAN2Q14206 197 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 ETFDHQ16134 617 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 NTRK2Q16620 822 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 PHKG1Q16816 387 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 EIPR1Q53HC9 387 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 TOR1AIP1Q5JTV8 583 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 DESI1Q6ICB0 168 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 MRNIPQ6NTE8 343 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 CES3Q6UWW8 571 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 LIAT1Q6ZQX7 453 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 SH2D5Q6ZV89 423 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 KIAA1328Q86T90 577 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 PRUNE1Q86TP1 453 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 CILP2Q8IUL8 1156 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 GCNT2Q8N0V5 402 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 SLC15A4Q8N697 577 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 ZNF611Q8N823 705 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 FAM47BQ8NA70 645 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 KCNJ9Q92806 393 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 NEIL2Q969S2 332 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 GAL3ST3Q96A11 431 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 ALKBH8Q96BT7 664 aaKnown RBP7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 PYCR2Q96C36 320 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 INTS12Q96CB8 462 aaKnown RBP7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 CTHRC1Q96CG8 243 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 SNF8Q96H20 258 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 ZNF597Q96LX8 424 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 JSRP1Q96MG2 331 aaPredicted RBP7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 TM9SF2Q99805 663 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 TMEM204Q9BSN7 226 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 HAUS8Q9BT25 410 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 DOHHQ9BU89 302 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 MED18Q9BUE0 208 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 KIFC1Q9BW19 673 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 ALOXE3Q9BYJ1 711 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 RBSNQ9H1K0 784 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 HOMER3Q9NSC5 361 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 AMFRQ9UKV5 643 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 C15orf41Q9Y2V0 281 aa7.02□□□□□ -1.29
HERPUD1-206ENST00000563343 A0A0G2JN53 185 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 A0A1W2PNV4 684 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 C17orf105B2RV13 164 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 HS3ST1O14792 307 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 HCRTR2O43614 444 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 TRAPPC6AO75865 159 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 IFNA16P05015 189 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 THBDP07204 575 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 CYP4B1P13584 511 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 ETS1P14921 441 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 RPL22P35268 128 aaKnown RBP7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 CPOXP36551 454 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 DIO3P55073 304 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 LIM2P55344 173 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 SESN2P58004 480 aaPredicted RBP7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 BTN3A2P78410 334 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 TIAL1Q01085 375 aaKnown RBP eCLIP7.01□□□□□ -1.295e-7■■■■□ 24.5
HERPUD1-206ENST00000563343 GAB1Q13480 694 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 OASLQ15646 514 aaKnown RBP7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 BICRALQ6AI39 1079 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 VWA1Q6PCB0 445 aa7.01□□□□□ -1.29
HERPUD1-206ENST00000563343 ZNF704Q6ZNC4 412 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms