RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 EIPR1Q53HC9 387 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 VWA2Q5GFL6 755 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 ZNF506Q5JVG8 444 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 WDR25Q64LD2 544 aaPredicted RBP2.23□□□□□ -2.05
GYPB-207ENST00000506679 LEMD1Q68G75 181 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 ALKBH5Q6P6C2 394 aaKnown RBP2.23□□□□□ -2.05
GYPB-207ENST00000506679 EMBQ6PCB8 327 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 ZNF730Q6ZMV8 503 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 CEACAM19Q7Z692 300 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 ITIH5Q86UX2 942 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 TMEM126BQ8IUX1 230 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 CCDC71Q8IV32 467 aaPredicted RBP2.23□□□□□ -2.05
GYPB-207ENST00000506679 SPAG16Q8N0X2 631 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 RTL3Q8N8U3 475 aaKnown RBP2.23□□□□□ -2.05
GYPB-207ENST00000506679 NAT8LQ8N9F0 302 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 SUMF1Q8NBK3 374 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 CCDC197Q8NCU1 140 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 OR4Q3Q8NH05 313 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 PRCCQ92733 491 aaPredicted RBP2.23□□□□□ -2.05
GYPB-207ENST00000506679 PNPLA2Q96AD5 504 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 PCED1BQ96HM7 432 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 CDHR1Q96JP9 859 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 RUNDC3BQ96NL0 473 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 AGPAT1Q99943 283 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 HSD17B14Q9BPX1 270 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 NTMT1Q9BV86 223 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 RBM24Q9BX46 236 aaKnown RBP2.23□□□□□ -2.05
GYPB-207ENST00000506679 LRRCC1Q9C099 1032 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 WWP1Q9H0M0 922 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 NAPBQ9H115 298 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 ARGLU1Q9NWB6 273 aaPredicted RBP2.23□□□□□ -2.05
GYPB-207ENST00000506679 ZNF446Q9NWS9 450 aa2.23□□□□□ -2.05
GYPB-207ENST00000506679 TECRQ9NZ01 308 aaKnown RBP2.23□□□□□ -2.05
GYPB-207ENST00000506679 MRPL11Q9Y3B7 192 aaKnown RBP2.23□□□□□ -2.05
GYPB-207ENST00000506679 FGD5Q6ZNL6 1462 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 LRRD1A4D1F6 860 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 FOXI3A8MTJ6 420 aaPredicted RBP2.22□□□□□ -2.05
GYPB-207ENST00000506679 E2F3O00716 465 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 KIAA0513O60268 411 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 SH3BGRLO75368 114 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 CSO75390 466 aaKnown RBP2.22□□□□□ -2.05
GYPB-207ENST00000506679 CRCPO75575 148 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 AKAP3O75969 853 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 OR6A2O95222 327 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 CALCAP01258 141 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 IGHG3P01860 377 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 MT-ND1P03886 318 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 LYNP07948 512 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 SPRP35270 261 aaPredicted RBP2.22□□□□□ -2.05
GYPB-207ENST00000506679 CYLC2Q14093 348 aaPredicted RBP2.22□□□□□ -2.05
GYPB-207ENST00000506679 MORF4L2Q15014 288 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 C17orf58Q2M2W7 97 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 ZNF674Q2M3X9 581 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 WSCD2Q2TBF2 565 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 SLC39A12Q504Y0 691 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 EPC2Q52LR7 807 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 CCDC184Q52MB2 194 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 C1QTNF12Q5T7M4 302 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 C1orf189Q5VU69 101 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 RNLSQ5VYX0 342 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 SEL1L3Q68CR1 1132 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 RFWD3Q6PCD5 774 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 PRSS42Q7Z5A4 293 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 HPS6Q86YV9 775 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 HSCBQ8IWL3 235 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 THEM5Q8N1Q8 247 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 SIDT2Q8NBJ9 832 aaKnown RBP2.22□□□□□ -2.05
GYPB-207ENST00000506679 CHDHQ8NE62 594 aaPredicted RBP2.22□□□□□ -2.05
GYPB-207ENST00000506679 OR1K1Q8NGR3 316 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 TYMSOSQ8TAI1 123 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 ITLN1Q8WWA0 313 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 TCP11Q8WWU5 503 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 HAS2Q92819 552 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 FAM46BQ96A09 425 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 MRPL24Q96A35 216 aaKnown RBP2.22□□□□□ -2.05
GYPB-207ENST00000506679 CAPNS2Q96L46 248 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 DDX50Q9BQ39 737 aaKnown RBP2.22□□□□□ -2.05
GYPB-207ENST00000506679 CXXC4Q9H2H0 198 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 LIME1Q9H400 295 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 NT5DC2Q9H857 520 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 FAM212BQ9NTI7 297 aaPredicted RBP2.22□□□□□ -2.05
GYPB-207ENST00000506679 ITM2BQ9Y287 266 aa2.22□□□□□ -2.05
GYPB-207ENST00000506679 A0A1W2PQ72 361 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 SH3PXD2BA1X283 911 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 SMIM30A4D0T7 59 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 C5orf51A6NDU8 294 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 NEDD8-MDP1E9PL57 170 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 RTN2O75298 545 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 TXNDC12O95881 172 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 GSTA2P09210 222 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 KRTAP1-4P0C5Y4 121 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 GP9P14770 177 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 B4GALT1P15291 398 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 FCARP24071 287 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 PPP2R1AP30153 589 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 CASP3P42574 277 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 MTIF2P46199 727 aaKnown RBP2.21□□□□□ -2.06
GYPB-207ENST00000506679 NOVP48745 357 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 GIT2Q14161 759 aa2.21□□□□□ -2.06
GYPB-207ENST00000506679 GK2Q14410 553 aaPredicted RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms