RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 AHRRA9YTQ3 701 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 CYR61O00622 381 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 CES2O00748 559 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 CASKO14936 926 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 CTNSO60931 367 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 WDR47O94967 919 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 ETHE1O95571 254 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 EPPINO95925 133 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 KRT14P02533 472 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 FGGP02679 453 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 COX7A2P14406 83 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 CEACAM8P31997 349 aaPredicted RBP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 MSH2P43246 934 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 MTTPP55157 894 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 LIM2P55344 173 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 SORDQ00796 357 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 CRYZQ08257 329 aaKnown RBP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 CBLBQ13191 982 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 EFTUD2Q15029 972 aaKnown RBP eCLIP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 ZNF791Q3KP31 576 aaPredicted RBP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 DRICH1Q6PGQ1 229 aaPredicted RBP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 POMZP3Q6PJE2 187 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 FRA10AC1Q70Z53 315 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 YTHDF3Q7Z739 585 aaKnown RBP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 OR4N5Q8IXE1 308 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 C9orf40Q8IXQ3 194 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 AGGF1Q8N302 714 aaeCLIP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 LRRC25Q8N386 305 aaPredicted RBP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 RASGEF1CQ8N431 466 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 C2CD4AQ8NCU7 369 aaPredicted RBP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 SIMC1Q8NDZ2 872 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 GABPB2Q8TAK5 448 aaPredicted RBP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 SPACA9Q96E40 222 aaPredicted RBP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 ZNF597Q96LX8 424 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 QRFPRQ96P65 431 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 DGAT2Q96PD7 388 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 SERINC2Q96SA4 455 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 WDR83Q9BRX9 315 aaKnown RBP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 RBM24Q9BX46 236 aaKnown RBP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 REXO4Q9GZR2 422 aaKnown RBP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 UBTD1Q9HAC8 227 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 XAB2Q9HCS7 855 aaKnown RBP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 ACKR4Q9NPB9 350 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 GALNT8Q9NY28 637 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 ZNF629Q9UEG4 869 aaPredicted RBP6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 TRPS1Q9UHF7 1281 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 SLC6A5Q9Y345 797 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 DNHD1Q96M86 4753 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 JMJD1CQ15652 2540 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 MAGEB16A2A368 324 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 LRIT2A6NDA9 550 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 SYNDIG1LA6NDD5 238 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 ANKDD1BA6NHY2 528 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 NCF1BA6NI72 391 aaPredicted RBP6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 NCF1CA8MVU1 366 aaPredicted RBP6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 CDC7O00311 574 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 RTCAO00442 366 aaKnown RBP6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 CLGNO14967 610 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 H2AFYO75367 372 aaKnown RBP6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 SH3BGRLO75368 114 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 ERN1O75460 977 aaKnown RBP6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 ACSL3O95573 720 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 ENO2P09104 434 aaPredicted RBP6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 TMIGD3P0DMS9 266 aaPredicted RBP6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 C1GALT1C1LP0DN25 315 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 MLNP12872 115 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 NCF1P14598 390 aaPredicted RBP6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 CTSSP25774 331 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 GABRB3P28472 473 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 OPRM1P35372 400 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 TIMP3P35625 211 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 CPOXP36551 454 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 GDF5P43026 501 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 MAGEA6P43360 314 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 MASP1P48740 699 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 ZNF75DP51815 510 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 SERTAD2Q14140 314 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 RCN2Q14257 317 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 CRYMQ14894 314 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 BBS9Q3SYG4 887 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 FBXO48Q5FWF7 155 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 PIGGQ5H8A4 983 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 ARMC3Q5W041 872 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 NSUN5P2Q63ZY6 315 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 BICRALQ6AI39 1079 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 ABHD17CQ6PCB6 329 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 SBSNQ6UWP8 590 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 PLXDC2Q6UX71 529 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 TMIGD1Q6UXZ0 262 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 TMEM64Q6YI46 380 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 PM20D2Q8IYS1 436 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 C9orf106Q8NAJ2 232 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 TTLQ8NG68 377 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 OR2L5Q8NG80 312 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 OR8K3Q8NH51 312 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 PAQR8Q8TEZ7 354 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 ZNF721Q8TF20 911 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 DIO2Q92813 273 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 SENP5Q96HI0 755 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms