RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 CYP4V2Q6ZWL3 525 aaPredicted RBP2.75□□□□□ -1.97
VPS50-219ENST00000495039 MCM10Q7L590 875 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 TMEM126BQ8IUX1 230 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 NUP93Q8N1F7 819 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 SPATA18Q8TC71 538 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 PCNPQ8WW12 178 aaKnown RBP2.75□□□□□ -1.97
VPS50-219ENST00000495039 LIPHQ8WWY8 451 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 C11orf52Q96A22 123 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 ANKRD27Q96NW4 1050 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 TNFRSF13CQ96RJ3 184 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 ERGIC2Q96RQ1 377 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 CACNG6Q9BXT2 260 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 ACPTQ9BZG2 426 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 MOB1AQ9H8S9 216 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 MED17Q9NVC6 651 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 PLEK2Q9NYT0 353 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 ZNF581Q9P0T4 197 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 TRPC4Q9UBN4 977 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 UBQLN2Q9UHD9 624 aa2.75□□□□□ -1.97
VPS50-219ENST00000495039 TRGV8A0A0C4DH27 118 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 ATP6AP2A0A1C7CYW4 349 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 TMCO5BA8MYB1 307 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 CACNB4O00305 520 aaPredicted RBP2.74□□□□□ -1.97
VPS50-219ENST00000495039 CHUKO15111 745 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 FMO6PO60774 539 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 SH3BGRLO75368 114 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 EZRP15311 586 aaKnown RBP2.74□□□□□ -1.97
VPS50-219ENST00000495039 SERPINH1P50454 418 aaKnown RBP2.74□□□□□ -1.97
VPS50-219ENST00000495039 ATP4BP51164 291 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 CCR4P51679 360 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 PEX3P56589 373 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 GABPAQ06546 454 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 RUNX3Q13761 415 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 MORF4L2Q15014 288 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 SPHARQ15513 63 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 ZNF79Q15937 498 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 C2orf83Q53S99 150 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 ATAD3CQ5T2N8 411 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 KCTD11Q693B1 232 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 REG3GQ6UW15 175 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 CARM1Q86X55 608 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 CACUL1Q86Y37 369 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 LAX1Q8IWV1 398 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 CCDC170Q8IYT3 715 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 C10orf53Q8N6V4 93 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 BANPQ8N9N5 519 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 TRPV3Q8NET8 790 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 OR6F1Q8NGZ6 308 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 AGAP11Q8TF27 550 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 SSC4DQ8WTU2 575 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 PRCCQ92733 491 aaPredicted RBP2.74□□□□□ -1.97
VPS50-219ENST00000495039 GUCD1Q96NT3 240 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 TAAR6Q96RI8 345 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 SDHCQ99643 169 aaPredicted RBP2.74□□□□□ -1.97
VPS50-219ENST00000495039 TEX13BQ9BXU2 312 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 OCR1Q9BZK8 76 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 SP140LQ9H930 580 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 AKIRIN1Q9H9L7 192 aaPredicted RBP2.74□□□□□ -1.97
VPS50-219ENST00000495039 NMUR1Q9HB89 426 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 THYN1Q9P016 225 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 STX8Q9UNK0 236 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 ERVK-19Q9WJR5 959 aa2.74□□□□□ -1.97
VPS50-219ENST00000495039 A0A0A6YYC8 382 aaPredicted RBP2.73□□□□□ -1.97
VPS50-219ENST00000495039 SMIM30A4D0T7 59 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 OR5H15A6NDH6 313 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 IGLON5A6NGN9 336 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 I3L1I5 382 aaPredicted RBP2.73□□□□□ -1.97
VPS50-219ENST00000495039 FBP2O00757 339 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 EPOP01588 193 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 SBK2P0C263 348 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 ANPEPP15144 967 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 PPP2R1AP30153 589 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 FHITP49789 147 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 KHKP50053 298 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 NME5P56597 212 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 RPS27AP62979 156 aaKnown RBP2.73□□□□□ -1.97
VPS50-219ENST00000495039 TEFQ10587 303 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 LCP2Q13094 533 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 STXBP2Q15833 593 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 ZNF674Q2M3X9 581 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 ODF2Q5BJF6 829 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 MUC21Q5SSG8 566 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 TMEM270Q6UE05 265 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 RPAINQ86UA6 219 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 UNC45BQ8IWX7 931 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 CARNMT1Q8N4J0 409 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 C4orf32Q8N8J7 132 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 CCDC197Q8NCU1 140 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 TCP11Q8WWU5 503 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 PTP4A1Q93096 173 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 FAM46BQ96A09 425 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 NABP1Q96AH0 204 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 CFAP36Q96G28 342 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 LRRCC1Q9C099 1032 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 SLC5A7Q9GZV3 580 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 ZDHHC6Q9H6R6 413 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 MARCH7Q9H992 704 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 MAGEF1Q9HAY2 307 aa2.73□□□□□ -1.97
VPS50-219ENST00000495039 PDFQ9HBH1 243 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms