RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SPIDRQ14159 915 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 CYBRD1Q53TN4 286 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 WDR45BQ5MNZ6 344 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.52□□□□□ -1.21
VMA21-203ENST00000477649 C6orf52Q5T4I8 152 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 OR52E8Q6IFG1 317 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 FBXO42Q6P3S6 717 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 ANGPTL8Q6UXH0 198 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 FAM92BQ6ZTR7 304 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 VN1R4Q7Z5H5 301 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 STK32CQ86UX6 486 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 KRT73Q86Y46 540 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 FAM46DQ8NEK8 389 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 ZNF555Q8NEP9 628 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 CCL4L1Q8NHW4 92 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 PNPT1Q8TCS8 783 aaKnown RBP7.52□□□□□ -1.21
VMA21-203ENST00000477649 MAGEE2Q8TD90 523 aaPredicted RBP7.52□□□□□ -1.21
VMA21-203ENST00000477649 UTP15Q8TED0 518 aaKnown RBP7.52□□□□□ -1.21
VMA21-203ENST00000477649 SLC37A2Q8TED4 501 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 ZDHHC1Q8WTX9 485 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 GEMIN6Q8WXD5 167 aaKnown RBP7.52□□□□□ -1.21
VMA21-203ENST00000477649 DNASE2BQ8WZ79 361 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 NR4A3Q92570 626 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 CIDECQ96AQ7 238 aaPredicted RBP7.52□□□□□ -1.21
VMA21-203ENST00000477649 HSH2DQ96JZ2 352 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 SLC6A18Q96N87 628 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 AMDHD1Q96NU7 426 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 ZNF607Q96SK3 696 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 CD180Q99467 661 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 RAB33BQ9H082 229 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 TRIM45Q9H8W5 580 aaPredicted RBP7.52□□□□□ -1.21
VMA21-203ENST00000477649 REEP1Q9H902 201 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 ERVMER34-1Q9H9K5 563 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 BCL2L10Q9HD36 194 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 DDX18Q9NVP1 670 aaKnown RBP7.52□□□□□ -1.21
VMA21-203ENST00000477649 HRASLS2Q9NWW9 162 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 THEGQ9P2T0 379 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 P2RX2Q9UBL9 471 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 POMT2Q9UKY4 750 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 DOLKQ9UPQ8 538 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 ERVK-11Q9UQG0 969 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 LIPT1Q9Y234 373 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 CSNK1G3Q9Y6M4 447 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 HSPE1-MOB4S4R3N1 261 aa7.52□□□□□ -1.21
VMA21-203ENST00000477649 A0A1W2PR48 441 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 KRBA1A5PL33 1030 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 ARRDC5A6NEK1 342 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 DUXAA6NLW8 204 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 LMO7DNF2Z398 122 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 PDLIM1O00151 329 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 AXIN1O15169 862 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 EMC8O43402 210 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 UGT2B11O75310 529 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 CLPTM1O96005 669 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 B3GALT4O96024 378 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 C9P02748 559 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 ETFAP13804 333 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 ALOX12P18054 663 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 POLR2CP19387 275 aaPredicted RBP7.51□□□□□ -1.21
VMA21-203ENST00000477649 MAGP20916 626 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 GPC1P35052 558 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 CXCL12P48061 93 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 NR1H2P55055 460 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 SMIM11AP58511 58 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 BTN3A2P78410 334 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 ADARB1P78563 741 aaKnown RBP7.51□□□□□ -1.21
VMA21-203ENST00000477649 TNFRSF17Q02223 184 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 ZP2Q05996 745 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 BIKQ13323 160 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 TOP3AQ13472 1001 aaPredicted RBP7.51□□□□□ -1.21
VMA21-203ENST00000477649 GAS6Q14393 721 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 NDUFA9Q16795 377 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.51□□□□□ -1.21
VMA21-203ENST00000477649 OGFOD3Q6PK18 319 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 CEACAM20Q6UY09 585 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 ZNF793Q6ZN11 406 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 USP51Q70EK9 711 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 Q7L0L9 218 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 C6orf120Q7Z4R8 191 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 C17orf82Q86X59 251 aaPredicted RBP7.51□□□□□ -1.21
VMA21-203ENST00000477649 RNF130Q86XS8 419 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 PLD3Q8IV08 490 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 SIX5Q8N196 739 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 C10orf111Q8N326 155 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 ARL10Q8N8L6 244 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 SETD9Q8NE22 299 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 OR8K5Q8NH50 307 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 OR10G6Q8NH81 332 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 PMM1Q92871 262 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 EXOSC8Q96B26 276 aaKnown RBP7.51□□□□□ -1.21
VMA21-203ENST00000477649 RMND5BQ96G75 393 aaPredicted RBP7.51□□□□□ -1.21
VMA21-203ENST00000477649 TCTN2Q96GX1 697 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 SLC35G5Q96KT7 338 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 LRRC61Q9BV99 259 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 SORBS1Q9BX66 1292 aaKnown RBP7.51□□□□□ -1.21
VMA21-203ENST00000477649 BTBD2Q9BX70 525 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 TRIM4Q9C037 500 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 DUSP15Q9H1R2 295 aaPredicted RBP7.51□□□□□ -1.21
VMA21-203ENST00000477649 GLIPR2Q9H4G4 154 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 KLHL31Q9H511 634 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms