RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-209	ENST00000467081	VCL	P18206	1134 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	GALK2	Q01415	458 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	RBBP4	Q09028	425 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	RPS6KA1	Q15418	735 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	POM121L1P	Q3SYA9	428 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	AARD	Q4LEZ3	155 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	TEX35	Q5T0J7	233 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	CNST	Q6PJW8	725 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	SIGLEC15	Q6ZMC9	328 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	SERPINA12	Q8IW75	414 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	OR13C5	Q8NGS8	318 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	AGAP11	Q8TF27	550 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	BPIFA2	Q96DR5	249 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	RUNDC3B	Q96NL0	473 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	ATG101	Q9BSB4	218 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	TRIM7	Q9C029	511 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	SP140L	Q9H930	580 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	MARCH7	Q9H992	704 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	DNAJC11	Q9NVH1	559 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	SH3GLB1	Q9Y371	365 aa		4.25	□□□□□ -1.73
CCNL1-209	ENST00000467081	ATRX	P46100	2492 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	TRBV5-4	A0A0C4DH59	114 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	LOC390937	A0A1W2PQ73	354 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	GTPBP10	A4D1E9	387 aa	Known RBP	4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	IGLON5	A6NGN9	336 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	KLLN	B2CW77	178 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081		E9PAM4	449 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	B4GAT1	O43505	415 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	SCO2	O43819	266 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	BCAS2	O75934	225 aa	Predicted RBP	4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	BPIFB3	P59826	476 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	ARF5	P84085	180 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	CEACAM7	Q14002	265 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	LRRC38	Q5VT99	294 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	RNLS	Q5VYX0	342 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	PM20D1	Q6GTS8	502 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	ETFRF1	Q6IPR1	90 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	TATDN1	Q6P1N9	297 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	ZNF619	Q8N2I2	560 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	CLEC1A	Q8NC01	280 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	KLHL30-AS1	Q8NEE0	82 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	OR1B1	Q8NGR6	318 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	KIAA1524	Q8TCG1	905 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	ITLN1	Q8WWA0	313 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	LIPH	Q8WWY8	451 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	BCL2L2	Q92843	193 aa	Predicted RBP	4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	RFT1	Q96AA3	541 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	C5orf30	Q96GV9	206 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	ANKRD27	Q96NW4	1050 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	TNMD	Q9H2S6	317 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	PNN	Q9H307	717 aa	Known RBP	4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	UBE2T	Q9NPD8	197 aa	Predicted RBP	4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	UBQLN2	Q9UHD9	624 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	VSIG4	Q9Y279	399 aa		4.24	□□□□□ -1.73
CCNL1-209	ENST00000467081	ILVBL	A1L0T0	632 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	CCDC162P	A2VCL2	907 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	KRT87P	A6NCN2	255 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	SERINC4	A6NH21	518 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	ANKDD1B	A6NHY2	528 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	CACNB4	O00305	520 aa	Predicted RBP	4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	FBP2	O00757	339 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	RAD51D	O75771	328 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	STAM2	O75886	525 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	FGF19	O95750	216 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	SEMA4F	O95754	770 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	FAM200B	P0CF97	657 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	CPA3	P15088	417 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	ELK3	P41970	407 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	SLC12A3	P55017	1021 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	UCP2	P55851	309 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	RPS27A	P62979	156 aa	Known RBP	4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	CYLC2	Q14093	348 aa	Predicted RBP	4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	RFTN2	Q52LD8	501 aa	Predicted RBP	4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	ZNF789	Q5FWF6	425 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	ZNF506	Q5JVG8	444 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	HIPK1	Q86Z02	1210 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	TBC1D10C	Q8IV04	446 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	ZBED8	Q8IZ13	594 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	ELMOD1	Q8N336	334 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	TMEM99	Q8N816	258 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	SAP25	Q8TEE9	199 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	SNRNP40	Q96DI7	357 aa	Known RBP	4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	IDI2	Q9BXS1	227 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	ACPT	Q9BZG2	426 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	ABCG8	Q9H221	673 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	MGAT4A	Q9UM21	535 aa		4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	NIP7	Q9Y221	180 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
CCNL1-209	ENST00000467081	P2RX6	O15547	441 aa		4.22	□□□□□ -1.73
CCNL1-209	ENST00000467081	GRAP2	O75791	330 aa		4.22	□□□□□ -1.73
CCNL1-209	ENST00000467081	VENTX	O95231	258 aa		4.22	□□□□□ -1.73
CCNL1-209	ENST00000467081	EZR	P15311	586 aa	Known RBP	4.22	□□□□□ -1.73
CCNL1-209	ENST00000467081	GAP43	P17677	238 aa		4.22	□□□□□ -1.73
CCNL1-209	ENST00000467081	MATK	P42679	507 aa		4.22	□□□□□ -1.73
CCNL1-209	ENST00000467081	FUT11	Q495W5	492 aa		4.22	□□□□□ -1.73
CCNL1-209	ENST00000467081	PLPP4	Q5VZY2	271 aa		4.22	□□□□□ -1.73
CCNL1-209	ENST00000467081	NEPRO	Q6NW34	567 aa		4.22	□□□□□ -1.73
CCNL1-209	ENST00000467081	RABEPK	Q7Z6M1	372 aa		4.22	□□□□□ -1.73
CCNL1-209	ENST00000467081	ASPG	Q86U10	573 aa		4.22	□□□□□ -1.73
CCNL1-209	ENST00000467081	LRRC49	Q8IUZ0	686 aa		4.22	□□□□□ -1.73
CCNL1-209	ENST00000467081	SIAH3	Q8IW03	269 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms