RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 SMIM10Q96HG1 83 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 SOX17Q9H6I2 414 aaPredicted RBP14.13□□□□□ -0.15
TPM3-205ENST00000328159 A4GALTQ9NPC4 353 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 ENTPD4Q9Y227 616 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 U3KQV3 271 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 LOC105369274A0A096LPK9 316 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 LOC102723532A0A0G2JNH3 316 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 STK25O00506 426 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 VILLO15195 856 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 SH3BP5O60239 455 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 PRAMEF10O60809 474 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 H6PDO95479 791 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 IFNA14P01570 189 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 PRKACGP22612 351 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 SNRPNP63162 240 aaKnown RBP14.12□□□□□ -0.15
TPM3-205ENST00000328159 TP53BP2Q13625 1128 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 IQCCQ4KMZ1 466 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 IFI44LQ53G44 452 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 ANKRD34AQ69YU3 496 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 REEP3Q6NUK4 255 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 ARMC6Q6NXE6 501 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 USP51Q70EK9 711 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 RNF44Q7L0R7 432 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 PATL1Q86TB9 770 aaKnown RBP14.12□□□□□ -0.15
TPM3-205ENST00000328159 OR4N4Q8N0Y3 316 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 PJA1Q8NG27 643 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 LZICQ8WZA0 190 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 RERGQ96A58 199 aaPredicted RBP14.12□□□□□ -0.15
TPM3-205ENST00000328159 CNRIP1Q96F85 164 aaPredicted RBP14.12□□□□□ -0.15
TPM3-205ENST00000328159 SLC35G5Q96KT7 338 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 SERINC2Q96SA4 455 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 MRPS26Q9BYN8 205 aaKnown RBP14.12□□□□□ -0.15
TPM3-205ENST00000328159 GABARAPL1Q9H0R8 117 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 MIR1-1HGQ9H1L0 117 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 SEMA3GQ9NS98 782 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 MYRFQ9Y2G1 1151 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 PADI2Q9Y2J8 665 aa14.12□□□□□ -0.15
TPM3-205ENST00000328159 H0YGG7 62 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 H3BNH8 94 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 CLIC3O95833 236 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 NR2F6P10588 404 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 TYRP1P17643 537 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 CSNK2A2P19784 350 aaPredicted RBP14.11□□□□□ -0.15
TPM3-205ENST00000328159 DNAJA1P31689 397 aaKnown RBP14.11□□□□□ -0.15
TPM3-205ENST00000328159 RXRGP48443 463 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 MAZP56270 477 aaKnown RBP14.11□□□□□ -0.15
TPM3-205ENST00000328159 ARF3P61204 181 aaPredicted RBP14.11□□□□□ -0.15
TPM3-205ENST00000328159 PPP1CAP62136 330 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 ZNF750Q32MQ0 723 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.11□□□□□ -0.15
TPM3-205ENST00000328159 TMEM64Q6YI46 380 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 CEP68Q76N32 757 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 GKN2Q86XP6 184 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 SUN3Q8TAQ9 357 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 SPPL2AQ8TCT8 520 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 LMX1AQ8TE12 382 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 RSC1A1Q92681 617 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 RMND5BQ96G75 393 aaPredicted RBP14.11□□□□□ -0.15
TPM3-205ENST00000328159 GIMAP4Q9NUV9 329 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 A0A1B0GTW7 788 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 C5orf58C9J3I9 102 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 HMGN4O00479 90 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 DPM1O60762 260 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 TFPTP0C1Z6 253 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 C8orf89P0DMQ9 161 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 FPR1P21462 350 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 FEN1P39748 380 aaKnown RBP14.11□□□□□ -0.15
TPM3-205ENST00000328159 ARHGDIAP52565 204 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 TNFRSF17Q02223 184 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 DUSP2Q05923 314 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 EPS8Q12929 822 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 APOFQ13790 326 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 DEFB134Q4QY38 66 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 RNF220Q5VTB9 566 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 ABHD13Q7L211 337 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 ZNF438Q7Z4V0 828 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 CCDC116Q8IYX3 515 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 OFCC1Q8IZS5 231 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 ARL10Q8N8L6 244 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 SFXN5Q8TD22 340 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 SLC38A5Q8WUX1 472 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 RAB8BQ92930 207 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 SPACA7Q96KW9 195 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 HSPA12BQ96MM6 686 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 MBOAT4Q96T53 435 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 TOR3AQ9H497 397 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 SERHL2Q9H4I8 314 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 REEP1Q9H902 201 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 PHF11Q9UIL8 331 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 POMT2Q9UKY4 750 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 RAB23Q9ULC3 237 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 PRUNE2Q8WUY3 3088 aa14.11□□□□□ -0.15
TPM3-205ENST00000328159 ABCA7Q8IZY2 2146 aa14.1□□□□□ -0.15
TPM3-205ENST00000328159 EML5Q05BV3 1969 aa14.1□□□□□ -0.15
TPM3-205ENST00000328159 B3GALT2O43825 422 aa14.1□□□□□ -0.15
TPM3-205ENST00000328159 HS6ST1O60243 411 aa14.1□□□□□ -0.15
TPM3-205ENST00000328159 PGM3O95394 542 aa14.1□□□□□ -0.15
TPM3-205ENST00000328159 CLPTM1O96005 669 aa14.1□□□□□ -0.15
TPM3-205ENST00000328159 BCHEP06276 602 aa14.1□□□□□ -0.15
TPM3-205ENST00000328159 ZNF10P21506 573 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms