RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 HAUS8Q9BT25 410 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 KIFC1Q9BW19 673 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 IL22Q9GZX6 179 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 HOMER3Q9NSC5 361 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 ZNF701Q9NV72 531 aaPredicted RBP9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 VTI1BQ9UEU0 232 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 SLC6A5Q9Y345 797 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 WIF1Q9Y5W5 379 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 A0A0G2JN53 185 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 A8MXE2 369 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 C17orf105B2RV13 164 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 CD5LO43866 347 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 TRAPPC6AO75865 159 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 IFNB1P01574 187 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 CRYGSP22914 178 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 LOXP28300 417 aaPredicted RBP9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 STIP1P31948 543 aaKnown RBP9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 RPL22P35268 128 aaKnown RBP9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 NPY2RP49146 381 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 RAB38P57729 211 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 FAM27E3Q08E93 113 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 TBL3Q12788 808 aaKnown RBP9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 CTBP1Q13363 440 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 OASLQ15646 514 aaKnown RBP9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 PLEKHM3Q6ZWE6 761 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 ZNF595Q8IYB9 648 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 TBC1D19Q8N5T2 526 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 FAM47BQ8NA70 645 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 OR10G3Q8NGC4 313 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 OR56A3Q8NH54 315 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 OR14A16Q8NHC5 309 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 CD200R1Q8TD46 325 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 ZNF721Q8TF20 911 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 ATG4AQ8WYN0 398 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 KCNJ9Q92806 393 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 NEIL2Q969S2 332 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 SPACA9Q96E40 222 aaPredicted RBP9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 MARK4Q96L34 752 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 SFXN3Q9BWM7 321 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 NPLQ9BXD5 320 aaPredicted RBP9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 UGT2B28Q9BY64 529 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 ALOXE3Q9BYJ1 711 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 PARVBQ9HBI1 364 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 INTS10Q9NVR2 710 aaKnown RBP9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 SYBUQ9NX95 663 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 KLHL28Q9NXS3 571 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 CNIH4Q9P003 139 aa9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 CNOT11Q9UKZ1 510 aaKnown RBP9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 CHCHD2Q9Y6H1 151 aaPredicted RBP9.54□□□□□ -0.88
CTDNEP1-202ENST00000570380 PRR14LQ5THK1 2151 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 CYR61O00622 381 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 SNPHO15079 494 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 CTNSO60931 367 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 MFAP3LO75121 409 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 TRIM3O75382 744 aaPredicted RBP9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 RCBTB2O95199 551 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 ETHE1O95571 254 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 TP53P04637 393 aaPredicted RBP9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 HPNP05981 417 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 SERPINA6P08185 405 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 FAM157CP0CG43 387 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 TNNI3P19429 210 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 MGAT1P26572 445 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 ANP32AP39687 249 aaKnown RBP9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 CDK9P50750 372 aaKnown RBP9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 ATP5J2P56134 94 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 REEP5Q00765 189 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 NHSL2Q5HYW2 709 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 WIPI1Q5MNZ9 446 aaPredicted RBP9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 NEPROQ6NW34 567 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 PLXDC2Q6UX71 529 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 ZNF441Q8N8Z8 693 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 FAM13CQ8NE31 585 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 TRPV3Q8NET8 790 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 NUBPLQ8TB37 319 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 SLC22A8Q8TCC7 542 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 ZPLD1Q8TCW7 415 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 TMEM171Q8WVE6 324 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 SLC5A11Q8WWX8 675 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 INTS12Q96CB8 462 aaKnown RBP9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 CSF3RQ99062 836 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 DOHHQ9BU89 302 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 C19orf24Q9BVV8 132 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 REG4Q9BYZ8 158 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 UBQLN3Q9H347 655 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 ZNF226Q9NYT6 803 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 BFARQ9NZS9 450 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 PCDHA13Q9Y5I0 950 aa9.53□□□□□ -0.88
CTDNEP1-202ENST00000570380 CTAGE9A4FU28 777 aa9.52□□□□□ -0.89
CTDNEP1-202ENST00000570380 EIF3FO00303 357 aaPredicted RBP9.52□□□□□ -0.89
CTDNEP1-202ENST00000570380 C8GP07360 202 aa9.52□□□□□ -0.89
CTDNEP1-202ENST00000570380 ZSCAN5DPP0CG00 497 aa9.52□□□□□ -0.89
CTDNEP1-202ENST00000570380 SAT1P21673 171 aa9.52□□□□□ -0.89
CTDNEP1-202ENST00000570380 HNRNPH1P31943 449 aaKnown RBP9.52□□□□□ -0.89
CTDNEP1-202ENST00000570380 CPOXP36551 454 aa9.52□□□□□ -0.89
CTDNEP1-202ENST00000570380 RUNX1T1Q06455 604 aa9.52□□□□□ -0.89
CTDNEP1-202ENST00000570380 DHX9Q08211 1270 aaKnown RBP9.52□□□□□ -0.89
CTDNEP1-202ENST00000570380 VEZF1Q14119 521 aa9.52□□□□□ -0.89
CTDNEP1-202ENST00000570380 RCAN2Q14206 197 aa9.52□□□□□ -0.89
CTDNEP1-202ENST00000570380 CSHL1Q14406 222 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms