RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 UBCP0CG48 685 aaKnown RBP6.98□□□□□ -1.29
CTNND1-229ENST00000531014 IL4RP24394 825 aa6.98□□□□□ -1.29
CTNND1-229ENST00000531014 AVPR1BP47901 424 aa6.98□□□□□ -1.29
CTNND1-229ENST00000531014 SOX9P48436 509 aa6.98□□□□□ -1.29
CTNND1-229ENST00000531014 CASP7P55210 303 aa6.98□□□□□ -1.29
CTNND1-229ENST00000531014 RPP30P78346 268 aaKnown RBP6.98□□□□□ -1.29
CTNND1-229ENST00000531014 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.98□□□□□ -1.297e-7■■□□□ 12.2
CTNND1-229ENST00000531014 OR2T5Q6IEZ7 315 aa6.98□□□□□ -1.29
CTNND1-229ENST00000531014 TRIM46Q7Z4K8 759 aa6.98□□□□□ -1.29
CTNND1-229ENST00000531014 DCUN1D3Q8IWE4 304 aa6.98□□□□□ -1.29
CTNND1-229ENST00000531014 RAVER1Q8IY67 606 aaKnown RBP6.98□□□□□ -1.29
CTNND1-229ENST00000531014 OR2T29Q8NH02 315 aa6.98□□□□□ -1.29
CTNND1-229ENST00000531014 SMPDL3BQ92485 455 aa6.98□□□□□ -1.29
CTNND1-229ENST00000531014 ISOC1Q96CN7 298 aa6.98□□□□□ -1.29
CTNND1-229ENST00000531014 LIN28AQ9H9Z2 209 aaKnown RBP6.98□□□□□ -1.29
CTNND1-229ENST00000531014 REV1Q9UBZ9 1251 aa6.98□□□□□ -1.29
CTNND1-229ENST00000531014 TBC1D3BA6NDS4 549 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 GOSR2O14653 212 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 PITPNBP48739 271 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 NKX2-5P52952 324 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-229ENST00000531014 BDH1Q02338 343 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 GSTM4Q03013 218 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 CLCQ05315 142 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 GRB10Q13322 594 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 RBM39Q14498 530 aaKnown RBP6.97□□□□□ -1.29
CTNND1-229ENST00000531014 MINDY4Q4G0A6 757 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 ACSBG2Q5FVE4 666 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 SH3PXD2AQ5TCZ1 1133 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 CHST9Q7L1S5 443 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 ANKRD46Q86W74 232 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 CCDC71LQ8N9Z2 235 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 NAXEQ8NCW5 288 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 OR8K5Q8NH50 307 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 NEIL3Q8TAT5 605 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 RNF128Q8TEB7 428 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 CDK15Q96Q40 435 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 LOC102724200A0A096LPH7 203 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-229ENST00000531014 KRBOX1C9JBD0 128 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 F8VP50 259 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 AGPSO00116 658 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 DIRAS1O95057 198 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 AGR2O95994 175 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 SLC35G6P0C7Q6 338 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 ENDOUP21128 410 aaKnown RBP6.97□□□□□ -1.29
CTNND1-229ENST00000531014 S1PR1P21453 382 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 DHPSP49366 369 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-229ENST00000531014 SELENOVP59797 346 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 ACTBP60709 375 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 ACTG1P63261 375 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 NFKB2Q00653 900 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 GAD2Q05329 585 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 DHCR24Q15392 516 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 ARL13AQ5H913 290 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-229ENST00000531014 HECTD2Q5U5R9 776 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 TMEM236Q5W0B7 351 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 KDELC1Q6UW63 502 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 PLEKHG7Q6ZR37 379 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 S100A7AQ86SG5 101 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 NOXA1Q86UR1 476 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 GALNT13Q8IUC8 556 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 FAM156AQ8NDB6 213 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 TMBIM1Q969X1 311 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 ASB9Q96DX5 294 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 ARSGQ96EG1 525 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 SGTBQ96EQ0 304 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 CORO1BQ9BR76 489 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 NUDT9Q9BW91 350 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 RBCK1Q9BYM8 510 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 CNTNAP3Q9BZ76 1288 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 MFFQ9GZY8 342 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 DNTTIP1Q9H147 329 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 MARCH2Q9P0N8 246 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 SCN4AP35499 1836 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 ABCA3Q99758 1704 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 RRP8O43159 456 aaKnown RBP6.97□□□□□ -1.29
CTNND1-229ENST00000531014 TLX2O43763 284 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-229ENST00000531014 ADAP00813 363 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 TFP02787 698 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 FPR1P21462 350 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 GJA5P36382 358 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 SLC1A3P43003 542 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 NDUFA6P56556 154 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 RPS14P62263 151 aaKnown RBP6.97□□□□□ -1.29
CTNND1-229ENST00000531014 MEDAGQ5VYS4 303 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 DCLRE1AQ6PJP8 1040 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 NPNTQ6UXI9 565 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 C3P1Q6ZMU1 363 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 KBTBD6Q86V97 674 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 SCML4Q8N228 414 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 OR56A1Q8NGH5 318 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 OR2A12Q8NGT7 310 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 GPR151Q8TDV0 419 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 ZNF681Q96N22 645 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 ZIC5Q96T25 663 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 IER2Q9BTL4 223 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 CTPS2Q9NRF8 586 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 EPHA6Q9UF33 1036 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 KLF15Q9UIH9 416 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 A0A1W2PPV4 95 aa6.97□□□□□ -1.29
CTNND1-229ENST00000531014 KIAA1324LA8MWY0 1029 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms