RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 AHCYL1O43865 530 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 PTP4A3O75365 173 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 STK17BO94768 372 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 TRBC1P01850 177 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 TCN2P20062 427 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 ARL3P36405 182 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 ZNF81P51508 661 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 STC1P52823 247 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 KLHL30Q0D2K2 578 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 NFATC2Q13469 925 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 PIGHQ14442 188 aaPredicted RBP4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 KRT81Q14533 505 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 KIR2DS5Q14953 304 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 DEFB109BQ30KR1 87 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 PIK3CD-AS1Q5SR53 167 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 C6orf10Q5SRN2 563 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 FAM69AQ5T7M9 428 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 ASPHD1Q5U4P2 390 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 RBM43Q6ZSC3 357 aaKnown RBP4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 ARHGAP22Q7Z5H3 698 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 BMPERQ8N8U9 685 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 NRACQ8N912 160 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 NFKBIDQ8NI38 313 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 ZCCHC10Q8TBK6 192 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 CREB3L4Q8TEY5 395 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 TEKT4Q8WW24 435 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 STARD8Q92502 1023 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 COX14Q96I36 57 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 CTRCQ99895 268 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 RIOK2Q9BVS4 552 aaKnown RBP4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 IFT27Q9BW83 186 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 TRIM7Q9C029 511 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 HAUS4Q9H6D7 363 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 ETNK2Q9NVF9 386 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 TAS2R10Q9NYW0 307 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 RCOR3Q9P2K3 495 aaPredicted RBP4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 TBC1D29Q9UFV1 150 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 KCNK6Q9Y257 313 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 TMEM184BQ9Y519 407 aaPredicted RBP4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 ZFHX3Q15911 3703 aa4.9□□□□□ -1.63
AMBRA1-209ENST00000529963 RELNP78509 3460 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 TMEM272A0A1B0GTI8 110 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 A0A1W2PRQ8 180 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 RGSL1A5PLK6 1076 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 LILRA5A6NI73 299 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 FAM90A7PA6NKC0 464 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 SH2D7A6NKC9 451 aaPredicted RBP4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 FAM90A22PA8MWA6 464 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 FAM90A12PA8MX19 464 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 FAM90A23PA8MXZ1 464 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 MKRN2OSH3BPM6 223 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 GTPBP1O00178 669 aaKnown RBP4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 CNOT3O75175 753 aaKnown RBP4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 ATP1A1P05023 1023 aaKnown RBP4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 CLEC3BP05452 202 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 ANKRD34CP0C6C1 535 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 F3P13726 295 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 OAS2P29728 719 aaKnown RBP4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 GGT5P36269 586 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 GARSP41250 739 aaKnown RBP4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 PRKCIP41743 596 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 RPL26P61254 145 aaKnown RBP4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 FOXM1Q08050 763 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 KLRB1Q12918 225 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 NAA25Q14CX7 972 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 IGFBP7Q16270 282 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 HADHQ16836 314 aaKnown RBP4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 PRICKLE4Q2TBC4 344 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 FILIP1LQ4L180 1135 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 ALG10Q5BKT4 473 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 ANKRD20A8PQ5CZ79 823 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 ALG10BQ5I7T1 473 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 CCDC122Q5T0U0 273 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 CYB5D1Q6P9G0 228 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 IYDQ6PHW0 289 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 RFLNAQ6ZTI6 216 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 APTXQ7Z2E3 356 aaKnown RBP4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 TIPARPQ7Z3E1 657 aaKnown RBP4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 ZNF571Q7Z3V5 609 aaPredicted RBP4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 TICAM1Q8IUC6 712 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 TEX26Q8N6G2 289 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 LRRC57Q8N9N7 239 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 SETD9Q8NE22 299 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 LPCAT1Q8NF37 534 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 LYSMD1Q96S90 227 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 TDRD1Q9BXT4 1180 aaKnown RBP4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 ULBP3Q9BZM4 244 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 SPRY4Q9C004 299 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 CARD9Q9H257 536 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 UCK1Q9HA47 277 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 APMAPQ9HDC9 416 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 EIF2B3Q9NR50 452 aaKnown RBP4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 RBM22Q9NW64 420 aaKnown RBP eCLIP4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 PPP1R14DQ9NXH3 145 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 PKD2L2Q9NZM6 624 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 AIPL1Q9NZN9 384 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 AMACRQ9UHK6 382 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 RPL26L1Q9UNX3 145 aaKnown RBP4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 DHDHQ9UQ10 334 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 CHKBQ9Y259 395 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms