RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 EPXP11678 715 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 CEACAM8P31997 349 aaPredicted RBP16.29■□□□□ 0.2
NUP50-218ENST00000493456 HNMTP50135 292 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 PLA2G16P53816 162 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 MTTPP55157 894 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 CDKL1Q00532 357 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 ADPRMQ3LIE5 342 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 SLC22A10Q63ZE4 541 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 CLEC9AQ6UXN8 241 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 SEM1Q6ZVN7 128 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 KIF18BQ86Y91 864 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 KRT78Q8N1N4 520 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 ZNF321PQ8N8H1 164 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 NAT8LQ8N9F0 302 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 NEIL3Q8TAT5 605 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 NUBPLQ8TB37 319 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 SREK1Q8WXA9 508 aaKnown RBP16.29■□□□□ 0.2
NUP50-218ENST00000493456 KIAA1191Q96A73 305 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 PITHD1Q9GZP4 211 aaPredicted RBP16.29■□□□□ 0.2
NUP50-218ENST00000493456 COPS7BQ9H9Q2 264 aaPredicted RBP16.29■□□□□ 0.2
NUP50-218ENST00000493456 SH2D2AQ9NP31 389 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 ZFP64Q9NPA5 681 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 ACKR4Q9NPB9 350 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 SEMA4BQ9NPR2 832 aaPredicted RBP16.29■□□□□ 0.2
NUP50-218ENST00000493456 RYDENQ9NUL5 291 aaKnown RBP16.29■□□□□ 0.2
NUP50-218ENST00000493456 AHRRA9YTQ3 701 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 TNNI3P19429 210 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 CERS1P27544 350 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 TIMP3P35625 211 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 PIGAP37287 484 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 KCNJ2P63252 427 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 SLBPQ14493 270 aaKnown RBP eCLIP16.28■□□□□ 0.2
NUP50-218ENST00000493456 PIGGQ5H8A4 983 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 FAM45BPQ6NSW5 357 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 TTC27Q6P3X3 843 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 Q71RC1 249 aaPredicted RBP16.28■□□□□ 0.2
NUP50-218ENST00000493456 LACC1Q8IV20 430 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 DND1Q8IYX4 353 aaKnown RBP16.28■□□□□ 0.2
NUP50-218ENST00000493456 LRRC25Q8N386 305 aaPredicted RBP16.28■□□□□ 0.2
NUP50-218ENST00000493456 LIX1Q8N485 282 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 NAXEQ8NCW5 288 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 SLC22A8Q8TCC7 542 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 FAM45AQ8TCE6 357 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 PAQR8Q8TEZ7 354 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 ANKRD7Q92527 254 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 ARSGQ96EG1 525 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 NT5DC2Q9H857 520 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 PLEKHF2Q9H8W4 249 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 VWA7Q9Y334 891 aa16.28■□□□□ 0.2
NUP50-218ENST00000493456 EML6Q6ZMW3 1958 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 ANKDD1BA6NHY2 528 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 WDR47O94967 919 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 EPPINO95925 133 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 IL2RAP01589 272 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 DCAF7P61962 342 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 SORDQ00796 357 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 TGM3Q08188 693 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 ZNF791Q3KP31 576 aaPredicted RBP16.27■□□□□ 0.2
NUP50-218ENST00000493456 ACSF3Q4G176 576 aaPredicted RBP16.27■□□□□ 0.2
NUP50-218ENST00000493456 SPANXN3Q5MJ09 141 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 ABHD17CQ6PCB6 329 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 ADGRD1Q6QNK2 874 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 SLCO4C1Q6ZQN7 724 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 SLC15A4Q8N697 577 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 RUNDC3BQ96NL0 473 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 EGFL8Q99944 293 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 NAT9Q9BTE0 207 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 SLC6A15Q9H2J7 730 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 LYRM4Q9HD34 91 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 BEX4Q9NWD9 120 aaPredicted RBP16.27■□□□□ 0.2
NUP50-218ENST00000493456 IKZF3Q9UKT9 509 aa16.27■□□□□ 0.2
NUP50-218ENST00000493456 JMJD1CQ15652 2540 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 LRRC3CA6NJW4 275 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 RFPL3SP0C7P2 107 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 COX7A2P14406 83 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 ZNF37AP17032 561 aaPredicted RBP16.26■□□□□ 0.19
NUP50-218ENST00000493456 ASPHQ12797 758 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 PCBP2Q15366 365 aaKnown RBP eCLIP16.26■□□□□ 0.196e-7■■■■■ 32.5
NUP50-218ENST00000493456 SF3B4Q15427 424 aaKnown RBP eCLIP16.26■□□□□ 0.194e-8■■■■■ 40.5
NUP50-218ENST00000493456 SHEQ5VZ18 495 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 CHSY3Q70JA7 882 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 PPIL6Q8IXY8 311 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 TNIP2Q8NFZ5 429 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 ZNF721Q8TF20 911 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 MAGOHBQ96A72 148 aaKnown RBP16.26■□□□□ 0.19
NUP50-218ENST00000493456 SPACA9Q96E40 222 aaPredicted RBP16.26■□□□□ 0.19
NUP50-218ENST00000493456 HSPBAP1Q96EW2 488 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 CERS2Q96G23 380 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 CAPS2Q9BXY5 557 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 ROGDIQ9GZN7 287 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 CNIH4Q9P003 139 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 OARD1Q9Y530 152 aa16.26■□□□□ 0.19
NUP50-218ENST00000493456 FN1P02751 2386 aaKnown RBP16.25■□□□□ 0.19
NUP50-218ENST00000493456 MYOCOSA0A1B0GUC4 107 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 CLCA1A8K7I4 914 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 DYRK3O43781 588 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 LDB3O75112 727 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 ETHE1O95571 254 aa16.25■□□□□ 0.19
NUP50-218ENST00000493456 TBX6O95947 436 aaPredicted RBP16.25■□□□□ 0.19
NUP50-218ENST00000493456 CXCR5P32302 372 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms