RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 SERPINB3P29508 390 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 BSGP35613 385 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 OR4D2P58180 307 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 TAS2R50P59544 299 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 RPS18P62269 152 aaKnown RBP7.78□□□□□ -1.16
SF3A1-208ENST00000485618 OLR1P78380 273 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 HMGCS1Q01581 520 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 TNFRSF17Q02223 184 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 TBL3Q12788 808 aaKnown RBP7.78□□□□□ -1.16
SF3A1-208ENST00000485618 RUNX2Q13950 521 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 SYT16Q17RD7 645 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 CLEC6AQ6EIG7 209 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 OR52E8Q6IFG1 317 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 ADNP2Q6IQ32 1131 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 NOXRED1Q6NXP6 359 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 JMJD6Q6NYC1 403 aaPredicted RBP7.78□□□□□ -1.16
SF3A1-208ENST00000485618 TMEM205Q6UW68 189 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 RIPOR1Q6ZS17 1223 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 SHISA6Q6ZSJ9 500 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 IKBIPQ70UQ0 350 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 UBE3DQ7Z6J8 389 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 MRGPREQ86SM8 312 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 LAPTM4BQ86VI4 370 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 APLFQ8IW19 511 aaPredicted RBP7.78□□□□□ -1.16
SF3A1-208ENST00000485618 KBTBD2Q8IY47 623 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 TMEM132CQ8N3T6 1108 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 C1orf52Q8N6N3 182 aaKnown RBP7.78□□□□□ -1.16
SF3A1-208ENST00000485618 NATD1Q8N6N6 113 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 AGR3Q8TD06 166 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 TM9SF4Q92544 642 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 C19orf60Q96EN9 201 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 MAGEB18Q96M61 343 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 KCNA7Q96RP8 456 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 ACPTQ9BZG2 426 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 VN1R1Q9GZP7 353 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 ING2Q9H160 280 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 ADNPQ9H2P0 1102 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 RYDENQ9NUL5 291 aaKnown RBP7.78□□□□□ -1.16
SF3A1-208ENST00000485618 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.78□□□□□ -1.16
SF3A1-208ENST00000485618 KCMF1Q9P0J7 381 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 ZDHHC2Q9UIJ5 367 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 HAO1Q9UJM8 370 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 FBXW2Q9UKT8 454 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 CLCA3PQ9Y6N3 262 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 COL6A6A6NMZ7 2263 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 ATMQ13315 3056 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 LOC102723996A0A087X1L8 192 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 A0A1B0GTL3 188 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 CDK2AP1O14519 115 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 PIP5K1BO14986 540 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 OR10H2O60403 315 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 SNNO75324 88 aaPredicted RBP7.77□□□□□ -1.17
SF3A1-208ENST00000485618 EEDO75530 441 aaKnown RBP7.77□□□□□ -1.17
SF3A1-208ENST00000485618 LYPLA1O75608 230 aaPredicted RBP7.77□□□□□ -1.17
SF3A1-208ENST00000485618 GPR75O95800 540 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 TBX6O95947 436 aaPredicted RBP7.77□□□□□ -1.17
SF3A1-208ENST00000485618 UMODP07911 640 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 PRPS2P11908 318 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 ALOX15P16050 662 aaPredicted RBP7.77□□□□□ -1.17
SF3A1-208ENST00000485618 CSNK2A2P19784 350 aaPredicted RBP7.77□□□□□ -1.17
SF3A1-208ENST00000485618 TIA1P31483 386 aaKnown RBP eCLIP7.77□□□□□ -1.17
SF3A1-208ENST00000485618 MPIP34949 423 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 FOXA1P55317 472 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 PLIN5Q00G26 463 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 RHAGQ02094 409 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 ZNF763Q0D2J5 394 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 TERF2Q15554 542 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 TCHHL1Q5QJ38 904 aaPredicted RBP7.77□□□□□ -1.17
SF3A1-208ENST00000485618 DCAF10Q5QP82 559 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 NDUFAF5Q5TEU4 345 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 MRM1Q6IN84 353 aaKnown RBP7.77□□□□□ -1.17
SF3A1-208ENST00000485618 SCIMPQ6UWF3 145 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 KIRREL2Q6UWL6 708 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 ZNF793Q6ZN11 406 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 R3HCC1LQ7Z5L2 792 aaKnown RBP7.77□□□□□ -1.17
SF3A1-208ENST00000485618 PPP1R32Q7Z5V6 425 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 HPS6Q86YV9 775 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 RNF175Q8N4F7 328 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 ZNF781Q8N8C0 355 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 FAM47BQ8NA70 645 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 FNDC5Q8NAU1 212 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 OR4K14Q8NGD5 310 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 OR14A16Q8NHC5 309 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 M1APQ8TC57 530 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 PIWIL2Q8TC59 973 aaKnown RBP7.77□□□□□ -1.17
SF3A1-208ENST00000485618 ART5Q96L15 291 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 C7orf26Q96N11 449 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 DGAT2Q96PD7 388 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 HBEGFQ99075 208 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 MAPKAP1Q9BPZ7 522 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 SIKE1Q9BRV8 207 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 ALOXE3Q9BYJ1 711 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 ZNF700Q9H0M5 742 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 MIEF1Q9NQG6 463 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 LANCL2Q9NS86 450 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 MRGBPQ9NV56 204 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 ATAD3AQ9NVI7 634 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 EHD3Q9NZN3 535 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 COPS7AQ9UBW8 275 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 FBXL4Q9UKA2 621 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms