RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 FOXB2Q5VYV0 432 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 MRM1Q6IN84 353 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 FRMPD2BQ6IN97 320 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 CBLL1Q75N03 491 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 STK32CQ86UX6 486 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 RBM12BQ8IXT5 1001 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 PACRGLQ8N7B6 248 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 TMEM105Q8N8V8 129 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 KLHDC7BQ96G42 594 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 HSH2DQ96JZ2 352 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 ANKRD60Q9BZ19 345 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 Q9H521 79 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 MAGIXQ9H6Y5 334 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 IL1RAPQ9NPH3 570 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 FAM86C1Q9NVL1 165 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 ACTR10Q9NZ32 417 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 DNAJB9Q9UBS3 223 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 SNX7Q9UNH6 387 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 TMA7Q9Y2S6 64 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 PRAMEF25A6NGN4 478 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 METTL12A8MUP2 240 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 G3V2T6 193 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZW10O43264 779 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 NOBOXO60393 691 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZNF217O75362 1048 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 SMIM18P0DKX4 95 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 ALPPL2P10696 532 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 JUNDP17535 347 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 TNFRSF1BP20333 461 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 FUT4P22083 530 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 CHI3L1P36222 383 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 DCTP40126 519 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 KCNJ10P78508 379 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 LRRC74AQ0VAA2 488 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 KIR2DS3Q14952 304 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZIK1Q3SY52 487 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 SLC36A3Q495N2 470 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 CYP27C1Q4G0S4 372 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 ERICH5Q6P6B1 374 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZDHHC21Q8IVQ6 265 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 APLFQ8IW19 511 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 TRIM48Q8IWZ4 208 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 UBALD2Q8IYN6 164 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 ARL10Q8N8L6 244 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 C11orf65Q8NCR3 313 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 FAM46DQ8NEK8 389 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 PJA1Q8NG27 643 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 CNRIP1Q96F85 164 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 TPD52L3Q96J77 140 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 QRFPRQ96P65 431 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 KCNC2Q96PR1 638 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 GSDMCQ9BYG8 508 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 HRASLS2Q9NWW9 162 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 PILRAQ9UKJ1 303 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 FBXW2Q9UKT8 454 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 RABL2BQ9UNT1 228 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 SAMD4AQ9UPU9 718 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 TOR1BO14657 336 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 PDPK1O15530 556 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 TNFSF14O43557 240 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 KDM1AO60341 852 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 TBX19O60806 448 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 NDUFS2O75306 463 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 FKBP9O95302 570 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 AIFM1O95831 613 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 C9P02748 559 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 CTSBP07858 339 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 C8orf89P0DMQ9 161 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 TYRP1P17643 537 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 PCGF2P35227 344 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 BTN3A2P78410 334 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 SIGLEC14Q08ET2 396 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 SLC9A5Q14940 896 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 CWF19L1Q69YN2 538 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 TNFAIP8L2Q6P589 184 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 SPESP1Q6UW49 350 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 FKBP9P1Q75LS8 142 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 CEP68Q76N32 757 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 EIF3MQ7L2H7 374 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 PARGQ86W56 976 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZDHHC13Q8IUH4 622 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 OFCC1Q8IZS5 231 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 EID3Q8N140 333 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZCCHC7Q8N3Z6 543 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 HORMAD2Q8N7B1 307 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 TRIML2Q8N7C3 387 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 NFKBIDQ8NI38 313 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 SUN3Q8TAQ9 357 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 RSC1A1Q92681 617 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 TAMM41Q96BW9 452 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 C7orf34Q96L11 122 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 AMDHD1Q96NU7 426 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 MAPKAP1Q9BPZ7 522 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 GLIPR2Q9H4G4 154 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 SERHL2Q9H4I8 314 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 ANKRA2Q9H9E1 313 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 SMPD3Q9NY59 655 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 TAS2R7Q9NYW3 318 aa8.37□□□□□ -1.07
CDC42SE1-204ENST00000483763 WBP11Q9Y2W2 641 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms