RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 NFE2L1Q14494 772 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 ZNF181Q2M3W8 571 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 ATAD3BQ5T9A4 648 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 FRMPD2BQ6IN97 320 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 TNFAIP8L2Q6P589 184 aaPredicted RBP10.43□□□□□ -0.74
C9orf3-214ENST00000473778 FAM83HQ6ZRV2 1179 aaPredicted RBP10.43□□□□□ -0.74
C9orf3-214ENST00000473778 KIAA0907Q7Z7F0 614 aaPredicted RBP10.43□□□□□ -0.74
C9orf3-214ENST00000473778 SIX5Q8N196 739 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 OXR1Q8N573 874 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 HORMAD2Q8N7B1 307 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 AMER2Q8N7J2 671 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 KREMEN2Q8NCW0 462 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 LILRB4Q8NHJ6 448 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 UCN3Q969E3 161 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 TIFAQ96CG3 184 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 TAPBPLQ9BX59 468 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 CPNE5Q9HCH3 593 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 C11orf16Q9NQ32 467 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 REV1Q9UBZ9 1251 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 ATP11BQ9Y2G3 1177 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 UGT2A1Q9Y4X1 527 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 SNX11Q9Y5W9 270 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 SNX8Q9Y5X2 465 aa10.43□□□□□ -0.74
C9orf3-214ENST00000473778 A0A0C4DFX4 3053 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 ANTXRLA6NF34 631 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 HIDE1A8MVS5 230 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 CCNB2O95067 398 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 POU1F1P28069 291 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 SOX3P41225 446 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 LSM11P83369 360 aaKnown RBP eCLIP10.42□□□□□ -0.74
C9orf3-214ENST00000473778 EIF4HQ15056 248 aaKnown RBP10.42□□□□□ -0.74
C9orf3-214ENST00000473778 PNCKQ6P2M8 343 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 TRIM40Q6P9F5 258 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 NXPE4Q6UWF7 544 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 GDPD3Q7L5L3 318 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 BPHLQ86WA6 291 aaPredicted RBP10.42□□□□□ -0.74
C9orf3-214ENST00000473778 C12orf40Q86WS4 652 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 TRAPPC5Q8IUR0 188 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 CELF5Q8N6W0 485 aaKnown RBP10.42□□□□□ -0.74
C9orf3-214ENST00000473778 CELF2-AS1Q8N7Q2 184 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 Q8N9G6 341 aaPredicted RBP10.42□□□□□ -0.74
C9orf3-214ENST00000473778 VANGL1Q8TAA9 524 aaPredicted RBP10.42□□□□□ -0.74
C9orf3-214ENST00000473778 SLC38A5Q8WUX1 472 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 SLC5A11Q8WWX8 675 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 RAB8BQ92930 207 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 HHIPL1Q96JK4 782 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 LRRC3BQ96PB8 259 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 OPALINQ96PE5 141 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 CDCA4Q9BXL8 241 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 TDP1Q9NUW8 608 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 C14orf119Q9NWQ9 140 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 CCDC59Q9P031 241 aaKnown RBP10.42□□□□□ -0.74
C9orf3-214ENST00000473778 KCND3Q9UK17 655 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 PCDHGB6Q9Y5F9 930 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 COL4A3Q01955 1670 aa10.42□□□□□ -0.74
C9orf3-214ENST00000473778 ISPDA4D126 451 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 A8MVJ9 347 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 PSMD11O00231 422 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 PLPP1O14494 284 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 GUCY1B2O75343 617 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 ENTPD6O75354 484 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 DLGAP3O95886 979 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 BCHEP06276 602 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 CKMT1AP12532 417 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 ALOX12P18054 663 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 SERPINB1P30740 379 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 CRISP1P54107 249 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 NTHL1P78549 312 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 PRKCDQ05655 676 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 ZNF630Q2M218 657 aaPredicted RBP10.41□□□□□ -0.74
C9orf3-214ENST00000473778 LRIT3Q3SXY7 679 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 FBXO43Q4G163 708 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 PAQR6Q6TCH4 344 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 CEACAM20Q6UY09 585 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 SLC39A5Q6ZMH5 540 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 UTS2BQ765I0 119 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 OLIG3Q7RTU3 272 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 SLC44A2Q8IWA5 706 aaPredicted RBP10.41□□□□□ -0.74
C9orf3-214ENST00000473778 DEPDC4Q8N2C3 294 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 CAPNS2Q96L46 248 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 FOPNLQ96NB1 174 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 KCNS3Q9BQ31 491 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 BARHL1Q9BZE3 327 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 HHATLQ9HCP6 504 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 ERVK13-1Q9NX77 482 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 FBXL12Q9NXK8 326 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 KLK4Q9Y5K2 254 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 A3GALT2U3KPV4 340 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 PRAMEF27A3QJZ7 478 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 WWP2O00308 870 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 QSOX1O00391 747 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 HAT1O14929 419 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 RHCEP18577 417 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 ACADLP28330 430 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 DSTNP60981 165 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 TEKQ02763 1124 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 ELOAQ14241 798 aaKnown RBP10.41□□□□□ -0.74
C9orf3-214ENST00000473778 DMC1Q14565 340 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 UAP1L1Q3KQV9 507 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 TCEAL5Q5H9L2 206 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms