RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 FBXO25Q8TCJ0 367 aa12.84□□□□□ -0.35
RPP40-203ENST00000464646 ZNF473Q8WTR7 871 aaKnown RBP12.84□□□□□ -0.35
RPP40-203ENST00000464646 KCTD4Q8WVF5 259 aa12.84□□□□□ -0.35
RPP40-203ENST00000464646 ATP6V1E2Q96A05 226 aa12.84□□□□□ -0.35
RPP40-203ENST00000464646 RBM18Q96H35 190 aaKnown RBP12.84□□□□□ -0.35
RPP40-203ENST00000464646 RASL10BQ96S79 203 aa12.84□□□□□ -0.35
RPP40-203ENST00000464646 MTERF1Q99551 399 aaKnown RBP12.84□□□□□ -0.35
RPP40-203ENST00000464646 MCMBPQ9BTE3 642 aa12.84□□□□□ -0.35
RPP40-203ENST00000464646 ACTR8Q9H981 624 aa12.84□□□□□ -0.35
RPP40-203ENST00000464646 LYRM4Q9HD34 91 aa12.84□□□□□ -0.35
RPP40-203ENST00000464646 GRHL1Q9NZI5 618 aa12.84□□□□□ -0.35
RPP40-203ENST00000464646 CPSF2Q9P2I0 782 aaKnown RBP12.84□□□□□ -0.35
RPP40-203ENST00000464646 VTI1BQ9UEU0 232 aa12.84□□□□□ -0.35
RPP40-203ENST00000464646 ACOT9Q9Y305 439 aa12.84□□□□□ -0.35
RPP40-203ENST00000464646 UNC79Q9P2D8 2635 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 SYCE1LA8MT33 242 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 OR10H2O60403 315 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 KERAO60938 352 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 WISP3O95389 354 aaPredicted RBP12.83□□□□□ -0.36
RPP40-203ENST00000464646 TBX6O95947 436 aaPredicted RBP12.83□□□□□ -0.36
RPP40-203ENST00000464646 HIST1H1TP22492 207 aaPredicted RBP12.83□□□□□ -0.36
RPP40-203ENST00000464646 TLX1P31314 330 aaPredicted RBP12.83□□□□□ -0.36
RPP40-203ENST00000464646 RNF4P78317 190 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 IRF9Q00978 393 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 SLC7A5Q01650 507 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 ASPHQ12797 758 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 DLG1Q12959 904 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 ZKSCAN8Q15776 578 aaPredicted RBP12.83□□□□□ -0.36
RPP40-203ENST00000464646 TBCCQ15814 346 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 PFKFB4Q16877 469 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 TMEM35AQ53FP2 167 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 CMPK2Q5EBM0 449 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 OR4C11Q6IEV9 310 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 ZNF585AQ6P3V2 769 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 ARHGAP11AQ6P4F7 1023 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 KLC3Q6P597 504 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 MEX3BQ6ZN04 569 aaKnown RBP12.83□□□□□ -0.36
RPP40-203ENST00000464646 RTL4Q6ZR62 310 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 GK5Q6ZS86 529 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 ISCA2Q86U28 154 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 SLC22A16Q86VW1 577 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 OR2M7Q8NG81 312 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 OR5M9Q8NGP3 310 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 PTPMT1Q8WUK0 201 aaPredicted RBP12.83□□□□□ -0.36
RPP40-203ENST00000464646 RGMAQ96B86 450 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 PPWD1Q96BP3 646 aaKnown RBP12.83□□□□□ -0.36
RPP40-203ENST00000464646 UBXN10Q96LJ8 280 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 LURAP1Q96LR2 239 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 GAL3ST4Q96RP7 486 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 CNPPD1Q9BV87 410 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 VPS11Q9H270 941 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 SACM1LQ9NTJ5 587 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 DEPPQ9NTK1 212 aa12.83□□□□□ -0.36
RPP40-203ENST00000464646 A0A087X1B8 175 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 ATP6AP2A0A1C7CYW4 349 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 PINLYPA6NC86 204 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 FANCGO15287 622 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 ATP6AP2O75787 350 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 SLC35E2BP0CK96 405 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 CNR1P21554 472 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 KIR3DL1P43629 444 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 DNASE1L1P49184 302 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 RPS13P62277 151 aaKnown RBP12.82□□□□□ -0.36
RPP40-203ENST00000464646 TRADDQ15628 312 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 FAM83EQ2M2I3 478 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 KHDRBS2Q5VWX1 349 aaKnown RBP12.82□□□□□ -0.36
RPP40-203ENST00000464646 GRHL2Q6ISB3 625 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 OPN5Q6U736 354 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 CYP20A1Q6UW02 462 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 FGD2Q7Z6J4 655 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 UBE3DQ7Z6J8 389 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 ZFP62Q8NB50 900 aaPredicted RBP12.82□□□□□ -0.36
RPP40-203ENST00000464646 OR7G3Q8NG95 312 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 C16orf52Q8NHV5 167 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 HUS1BQ8NHY5 278 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 SLC22A8Q8TCC7 542 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 PHF10Q8WUB8 498 aaKnown RBP12.82□□□□□ -0.36
RPP40-203ENST00000464646 ASB5Q8WWX0 329 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 RND1Q92730 232 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 WDR34Q96EX3 536 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 SCYL1Q96KG9 808 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 ART5Q96L15 291 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 JSRP1Q96MG2 331 aaPredicted RBP12.82□□□□□ -0.36
RPP40-203ENST00000464646 TTTY12Q9BZ98 90 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 TP63Q9H3D4 680 aaPredicted RBP12.82□□□□□ -0.36
RPP40-203ENST00000464646 RPF2Q9H7B2 306 aaKnown RBP12.82□□□□□ -0.36
RPP40-203ENST00000464646 ADGRE2Q9UHX3 823 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 PHF11Q9UIL8 331 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 CLDN16Q9Y5I7 305 aa12.82□□□□□ -0.36
RPP40-203ENST00000464646 DNAJC13O75165 2243 aa12.81□□□□□ -0.36
RPP40-203ENST00000464646 ZNF407Q9C0G0 2248 aa12.81□□□□□ -0.36
RPP40-203ENST00000464646 A0A0G2JMM0 328 aa12.81□□□□□ -0.36
RPP40-203ENST00000464646 IQANK1A0A1B0GTG1 560 aa12.81□□□□□ -0.36
RPP40-203ENST00000464646 A0A1W2PPB8 328 aa12.81□□□□□ -0.36
RPP40-203ENST00000464646 A0A1W2PRS3 328 aa12.81□□□□□ -0.36
RPP40-203ENST00000464646 ESYT3A0FGR9 886 aa12.81□□□□□ -0.36
RPP40-203ENST00000464646 KIR3DP1A8MWS1 328 aa12.81□□□□□ -0.36
RPP40-203ENST00000464646 FGF17O60258 216 aa12.81□□□□□ -0.36
RPP40-203ENST00000464646 PRKRAO75569 313 aaKnown RBP12.81□□□□□ -0.36
RPP40-203ENST00000464646 ETHE1O95571 254 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms