RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 DDX39BQ13838 428 aaKnown RBP16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 PCBP2Q15366 365 aaKnown RBP eCLIP16.34■□□□□ 0.219e-7■■■■□ 24.1
PDLIM2-208ENST00000416159 UAP1Q16222 522 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 PFKFB4Q16877 469 aa16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 MDGA2Q7Z553 956 aa16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 DOLPP1Q86YN1 238 aa16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 MYLK4Q86YV6 388 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 CHERPQ8IWX8 916 aaKnown RBP16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 PSD4Q8NDX1 1056 aa16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 OR5L2Q8NGL0 311 aa16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 HUS1BQ8NHY5 278 aa16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 AGAP11Q8TF27 550 aa16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 ANKRD9Q96BM1 317 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 PHF12Q96QT6 1004 aa16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 RASL10BQ96S79 203 aa16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 OR8D2Q9GZM6 311 aa16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 OR51B5Q9H339 312 aa16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 LIN28AQ9H9Z2 209 aaKnown RBP16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 MTRF1LQ9UGC7 380 aaKnown RBP16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 TNPO3Q9Y5L0 923 aaKnown RBP16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 CENPEQ02224 2701 aa16.34■□□□□ 0.21
PDLIM2-208ENST00000416159 E9PLN8 166 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 WWP2O00308 870 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 SAP18O00422 153 aaKnown RBP16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 UGDHO60701 494 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 COX7A2P14406 83 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 TLX1P31314 330 aaPredicted RBP16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 PTGER1P34995 402 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 SERPINB8P50452 374 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 HK2P52789 917 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 IGLV3-21P80748 117 aaPredicted RBP16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 SLAMF1Q13291 335 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 WHAMMP3Q1A5X7 153 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 METTL2BQ6P1Q9 378 aaKnown RBP16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 IL20RBQ6UXL0 311 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 C16orf47Q6ZP98 133 aaPredicted RBP16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 RELL1Q8IUW5 271 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 SLC2A12Q8TD20 617 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 PHF10Q8WUB8 498 aaKnown RBP16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 REPS1Q96D71 796 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 VKORC1Q9BQB6 163 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 TSPYL1Q9H0U9 437 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 ACSS3Q9H6R3 686 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 ACTR8Q9H981 624 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 NINJ2Q9NZG7 142 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 COPS7AQ9UBW8 275 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 PHF11Q9UIL8 331 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 PKDREJQ9NTG1 2253 aa16.33■□□□□ 0.2
PDLIM2-208ENST00000416159 ENO4A6NNW6 628 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 H0YIV9 168 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 ZNHIT1O43257 154 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 HS6ST1O60243 411 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 URI1O94763 535 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 OR6B1O95007 311 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 CLDN14O95500 239 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 PTX3P26022 381 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 PTGS2P35354 604 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 RFC3P40938 356 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 SOX3P41225 446 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 STT3AP46977 705 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 PIK3CGP48736 1102 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 GPR85P60893 370 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 RNF4P78317 190 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 ID2Q02363 134 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 GTF2H2Q13888 395 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 GTF2H2CQ6P1K8 395 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 FGD2Q7Z6J4 655 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 GPR180Q86V85 440 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 MCEMP1Q8IX19 187 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 ZCCHC7Q8N3Z6 543 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 ZNF321PQ8N8H1 164 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 FAM57AQ8TBR7 257 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 ZNF721Q8TF20 911 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 TANKQ92844 425 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 RBM18Q96H35 190 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 GPR78Q96P69 363 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 DGAT2Q96PD7 388 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 MTERF1Q99551 399 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 SORBS1Q9BX66 1292 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 FUT8Q9BYC5 575 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 VPS11Q9H270 941 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 RPF2Q9H7B2 306 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 DMRT3Q9NQL9 472 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 PSD3Q9NYI0 1048 aa16.32■□□□□ 0.2
PDLIM2-208ENST00000416159 A0A1B0GTH9 108 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 DYRK3O43781 588 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 FGF17O60258 216 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 ETHE1O95571 254 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 ALDOAP04075 364 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 PRF1P14222 555 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 PTGER4P35408 488 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 RPS13P62277 151 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 CMPK2Q5EBM0 449 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 PAOXQ6QHF9 649 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 OPN5Q6U736 354 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 RTL4Q6ZR62 310 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 RGS9BPQ6ZS82 235 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 GOLGA7Q7Z5G4 137 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 OR4N5Q8IXE1 308 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 SRRM1Q8IYB3 904 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms