RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 BROXQ5VW32 411 aa17.4■□□□□ 0.38
RXRB-202ENST00000374685 VASH1Q7L8A9 365 aaPredicted RBP17.4■□□□□ 0.38
RXRB-202ENST00000374685 CAMKMTQ7Z624 323 aa17.4■□□□□ 0.38
RXRB-202ENST00000374685 CADM3Q8N126 398 aa17.4■□□□□ 0.38
RXRB-202ENST00000374685 TTC29Q8NA56 475 aaPredicted RBP17.4■□□□□ 0.38
RXRB-202ENST00000374685 YIPF4Q9BSR8 244 aa17.4■□□□□ 0.38
RXRB-202ENST00000374685 DOHHQ9BU89 302 aa17.4■□□□□ 0.38
RXRB-202ENST00000374685 NLNQ9BYT8 704 aa17.4■□□□□ 0.38
RXRB-202ENST00000374685 ANKRD34BA5PLL1 514 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 ISM1B1AKI9 464 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 NDUFS4O43181 175 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 NARSO43776 548 aaKnown RBP17.39■□□□□ 0.38
RXRB-202ENST00000374685 BCHEP06276 602 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 C8orf89P0DMQ9 161 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 FPR1P21462 350 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 PPIBP23284 216 aaKnown RBP17.39■□□□□ 0.38
RXRB-202ENST00000374685 C21orf58P58505 322 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 CSNK1G2P78368 415 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 VEZF1Q14119 521 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 ZNF750Q32MQ0 723 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 TRIM40Q6P9F5 258 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 LSRQ86X29 649 aaPredicted RBP17.39■□□□□ 0.38
RXRB-202ENST00000374685 FBXL6Q8N531 539 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 OXR1Q8N573 874 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 PJA1Q8NG27 643 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 OR52N2Q8NGI0 321 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 TM4SF18Q96CE8 201 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 SIPA1Q96FS4 1042 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 APOOQ9BUR5 198 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 ZNF717Q9BY31 904 aaPredicted RBP17.39■□□□□ 0.38
RXRB-202ENST00000374685 AMBNQ9NP70 447 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 USE1Q9NZ43 259 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 CORO2BQ9UQ03 480 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 IFT52Q9Y366 437 aa17.39■□□□□ 0.38
RXRB-202ENST00000374685 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.39■□□□□ 0.37
RXRB-202ENST00000374685 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.39■□□□□ 0.37
RXRB-202ENST00000374685 CACNB4O00305 520 aaPredicted RBP17.39■□□□□ 0.37
RXRB-202ENST00000374685 ATXN8OSP0DMR3 200 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 MATN1P21941 496 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 PCGF2P35227 344 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 BSGP35613 385 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 RAB28P51157 221 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 ISL1P61371 349 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 LAIR2Q6ISS4 152 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 ZNF773Q6PK81 442 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 IGFN1Q86VF2 1251 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 RAB42Q8N4Z0 105 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 OR8K5Q8NH50 307 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 C7orf34Q96L11 122 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 ACSL5Q9ULC5 683 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 SCN2AQ99250 2005 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 M0R129 80 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 TNFRSF21O75509 655 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 ANGPTL1O95841 491 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 GPC1P35052 558 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 CLK3P49761 638 aaKnown RBP17.39■□□□□ 0.37
RXRB-202ENST00000374685 SF3B4Q15427 424 aaKnown RBP eCLIP17.39■□□□□ 0.372e-7■■■■□ 24.8
RXRB-202ENST00000374685 PEX5LQ8IYB4 626 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 OR2A1Q8NGT9 310 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 DPH7Q9BTV6 452 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 MRPS30Q9NP92 439 aaKnown RBP17.39■□□□□ 0.37
RXRB-202ENST00000374685 LHX9Q9NQ69 397 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 RLIMQ9NVW2 624 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 PAK1IP1Q9NWT1 392 aaPredicted RBP17.39■□□□□ 0.37
RXRB-202ENST00000374685 FBXW2Q9UKT8 454 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 CARD8Q9Y2G2 431 aa17.39■□□□□ 0.37
RXRB-202ENST00000374685 TNFRSF10AO00220 468 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 TNFRSF11BO00300 401 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 SLC1A7O00341 560 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 CAPN5O15484 640 aaPredicted RBP17.38■□□□□ 0.37
RXRB-202ENST00000374685 PDPK1O15530 556 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 ERI3O43414 337 aaKnown RBP17.38■□□□□ 0.37
RXRB-202ENST00000374685 TCEA1P23193 301 aaKnown RBP17.38■□□□□ 0.37
RXRB-202ENST00000374685 CXCR2P25025 360 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 ACSL1P33121 698 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 EIF2DP41214 584 aaKnown RBP17.38■□□□□ 0.37
RXRB-202ENST00000374685 SELENOWP63302 87 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 PDE7AQ13946 482 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 AGAP7PQ5VUJ5 663 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 ZNF691Q5VV52 312 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 KIAA1958Q8N8K9 716 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 MINDY2Q8NBR6 621 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 HPS1Q92902 700 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 TEFMQ96QE5 360 aaKnown RBP17.38■□□□□ 0.37
RXRB-202ENST00000374685 CDCA3Q99618 268 aaPredicted RBP17.38■□□□□ 0.37
RXRB-202ENST00000374685 C1QTNF2Q9BXJ5 285 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 LHPPQ9H008 270 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 BTBD1Q9H0C5 482 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 SIAEQ9HAT2 523 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 C1GALT1Q9NS00 363 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 NDUFAF4Q9P032 175 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 TMEM229AB2RXF0 380 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 FAM227AF5H4B4 570 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 PRAMEF10O60809 474 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 VIPP01282 170 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 DDCP20711 480 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 CTHP32929 405 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 DMPKQ09013 629 aa17.38■□□□□ 0.37
RXRB-202ENST00000374685 GRSF1Q12849 480 aaKnown RBP eCLIP17.38■□□□□ 0.37
RXRB-202ENST00000374685 EPS8Q12929 822 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms