RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 SRP9P49458 86 aaKnown RBP12.66□□□□□ -0.38
IFT88-202ENST00000351808 ERVK-25P63136 954 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 FGL1Q08830 312 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 C1DQ13901 141 aaKnown RBP12.66□□□□□ -0.38
IFT88-202ENST00000351808 WASH2PQ6VEQ5 465 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 EEF1AKMT1Q8WVE0 214 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 FAM193BQ96PV7 902 aaPredicted RBP12.66□□□□□ -0.38
IFT88-202ENST00000351808 DMRTA2Q96SC8 542 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 DDOQ99489 341 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 ATF6BQ99941 703 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 CDCA7Q9BWT1 371 aaPredicted RBP12.66□□□□□ -0.38
IFT88-202ENST00000351808 SAP130Q9H0E3 1048 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 ZFR2Q9UPR6 939 aaKnown RBP12.66□□□□□ -0.38
IFT88-202ENST00000351808 A0A1B0GVC2 190 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 A6NIN4 97 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 NUDT7P0C024 238 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 ODC1P11926 461 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 PIPP12273 146 aaPredicted RBP12.66□□□□□ -0.38
IFT88-202ENST00000351808 HSPA7P48741 367 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 MAPKAPK2P49137 400 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 SELENOPP49908 381 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 MAZP56270 477 aaKnown RBP12.66□□□□□ -0.38
IFT88-202ENST00000351808 RAB8AP61006 207 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 CRHR2Q13324 411 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 GTF2H2Q13888 395 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 SWI5Q1ZZU3 235 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 SIRPB2Q5JXA9 342 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 RAET1GQ6H3X3 334 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 GTF2H2CQ6P1K8 395 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 NOTUMQ6P988 496 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 RGL4Q8IZJ4 473 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 UXS1Q8NBZ7 420 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 PROKR2Q8NFJ6 384 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 SLC38A3Q99624 504 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 ZNF624Q9P2J8 865 aaPredicted RBP12.66□□□□□ -0.38
IFT88-202ENST00000351808 CCNL1Q9UK58 526 aaPredicted RBP12.66□□□□□ -0.38
IFT88-202ENST00000351808 DLGAP4Q9Y2H0 992 aa12.66□□□□□ -0.38
IFT88-202ENST00000351808 GABRR3A8MPY1 467 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 ATG12O94817 140 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 ECDO95905 644 aaPredicted RBP12.65□□□□□ -0.38
IFT88-202ENST00000351808 ALDOBP05062 364 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 SULT1A3P0DMM9 295 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 SULT1A4P0DMN0 295 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 ARF4P18085 180 aaPredicted RBP12.65□□□□□ -0.38
IFT88-202ENST00000351808 UBA1P22314 1058 aaKnown RBP12.65□□□□□ -0.38
IFT88-202ENST00000351808 STC1P52823 247 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 DSC2Q02487 901 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 MAD2L1Q13257 205 aaPredicted RBP12.65□□□□□ -0.38
IFT88-202ENST00000351808 GRIN2CQ14957 1233 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 PRAMEF19Q5SWL8 479 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 SLC27A4Q6P1M0 643 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 ZNF621Q6ZSS3 439 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 WDR53Q7Z5U6 358 aaPredicted RBP12.65□□□□□ -0.38
IFT88-202ENST00000351808 LAS2Q8IYD9 372 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 ZNF454Q8N9F8 522 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 SIDT2Q8NBJ9 832 aaKnown RBP12.65□□□□□ -0.38
IFT88-202ENST00000351808 WDR20Q8TBZ3 569 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 HSD17B8Q92506 261 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 MRPS24Q96EL2 167 aaKnown RBP12.65□□□□□ -0.38
IFT88-202ENST00000351808 THAP7Q9BT49 309 aaPredicted RBP12.65□□□□□ -0.38
IFT88-202ENST00000351808 MED18Q9BUE0 208 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 NLNQ9BYT8 704 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 CHIAQ9BZP6 476 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 TMEM39BQ9GZU3 492 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 ZNF408Q9H9D4 720 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 ATP13A1Q9HD20 1204 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 BABAM2Q9NXR7 383 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 EVPLQ92817 2033 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 LTBP1Q14766 1721 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 TRBV23-1A0A0A0MS06 115 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 ANXA2P2A6NMY6 339 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 DPM1O60762 260 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 SNAPINO95295 136 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 OPN1SWP03999 348 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 TCRBP04435 133 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 CXCL2P19875 107 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 WARSP23381 471 aaKnown RBP12.65□□□□□ -0.38
IFT88-202ENST00000351808 ZP1P60852 638 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 RPS14P62263 151 aaKnown RBP12.65□□□□□ -0.38
IFT88-202ENST00000351808 ATAT1Q5SQI0 421 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 EFCAB12Q6NXP0 572 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 FAM198BQ6UWH4 519 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 B3GLCTQ6Y288 498 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 SLC16A13Q7RTY0 426 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 TRMT11Q7Z4G4 463 aaKnown RBP12.65□□□□□ -0.38
IFT88-202ENST00000351808 OR4L1Q8NH43 312 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 DNAJB8Q8NHS0 232 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 GTF3C2Q8WUA4 911 aaPredicted RBP12.65□□□□□ -0.38
IFT88-202ENST00000351808 LINGO1Q96FE5 620 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 ELMOD3Q96FG2 381 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 C12orf66Q96MD2 445 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 SLC25A51Q9H1U9 297 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 BIN3Q9NQY0 253 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 DCAF16Q9NXF7 216 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 EXTL2Q9UBQ6 330 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 CLCA2Q9UQC9 943 aa12.65□□□□□ -0.38
IFT88-202ENST00000351808 RRN3P2A6NIE6 340 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 MPTX1A8MV57 137 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 CHURC1-FNTBB4DL54 471 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 SIX6O95475 246 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms