RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 MAP3K13O43283 966 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 AIFM1O95831 613 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 SLC35G6P0C7Q6 338 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 CD38P28907 300 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 SELENOWP63302 87 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 KCNJ10P78508 379 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 ADARB1P78563 741 aaKnown RBP20.14■□□□□ 0.81
ATG4D-201ENST00000309469 PPP2R2BQ00005 443 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 LIN52Q52LA3 116 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 TMEM26Q6ZUK4 368 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 HIPK1Q86Z02 1210 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 GJD3Q8N144 294 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 CADM4Q8NFZ8 388 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 UTP15Q8TED0 518 aaKnown RBP20.14■□□□□ 0.81
ATG4D-201ENST00000309469 THAP11Q96EK4 314 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 KLHL25Q9H0H3 589 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 PCED1AQ9H1Q7 454 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 VNN3Q9NY84 501 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 FANCMQ8IYD8 2048 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 A0A1W2PR77 199 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 H0YAE9 185 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 B4GALT2O60909 372 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 ALBP02768 609 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 ZNF888P0CJ79 500 aaPredicted RBP20.14■□□□□ 0.81
ATG4D-201ENST00000309469 THRBP10828 461 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 LSSP48449 732 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 RGS19P49795 217 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 RELAQ04206 551 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 ELOAQ14241 798 aaKnown RBP20.14■□□□□ 0.81
ATG4D-201ENST00000309469 C18orf63Q68DL7 685 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 CEACAM20Q6UY09 585 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 SLC30A8Q8IWU4 369 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 FBXL20Q96IG2 436 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 BBS4Q96RK4 519 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 RBM4BQ9BQ04 359 aaKnown RBP20.14■□□□□ 0.81
ATG4D-201ENST00000309469 RBM4Q9BWF3 364 aaKnown RBP20.14■□□□□ 0.81
ATG4D-201ENST00000309469 LYARQ9NX58 379 aaKnown RBP20.14■□□□□ 0.81
ATG4D-201ENST00000309469 U3KQV3 271 aa20.14■□□□□ 0.81
ATG4D-201ENST00000309469 M0QX08 132 aa20.13■□□□□ 0.81
ATG4D-201ENST00000309469 PROM1O43490 865 aa20.13■□□□□ 0.81
ATG4D-201ENST00000309469 PGM3O95394 542 aa20.13■□□□□ 0.81
ATG4D-201ENST00000309469 CLPTM1O96005 669 aa20.13■□□□□ 0.81
ATG4D-201ENST00000309469 NELFEP18615 380 aaKnown RBP20.13■□□□□ 0.81
ATG4D-201ENST00000309469 NTSP30990 170 aa20.13■□□□□ 0.81
ATG4D-201ENST00000309469 CCT3P49368 545 aaKnown RBP20.13■□□□□ 0.81
ATG4D-201ENST00000309469 RPS26P62854 115 aaKnown RBP20.13■□□□□ 0.81
ATG4D-201ENST00000309469 HHEXQ03014 270 aa20.13■□□□□ 0.81
ATG4D-201ENST00000309469 ZIK1Q3SY52 487 aaPredicted RBP20.13■□□□□ 0.81
ATG4D-201ENST00000309469 SHQ1Q6PI26 577 aaKnown RBP20.13■□□□□ 0.81
ATG4D-201ENST00000309469 DGLUCYQ7Z3D6 616 aa20.13■□□□□ 0.81
ATG4D-201ENST00000309469 RBM12BQ8IXT5 1001 aaKnown RBP20.13■□□□□ 0.81
ATG4D-201ENST00000309469 SPEM1Q8N4L4 309 aa20.13■□□□□ 0.81
ATG4D-201ENST00000309469 HORMAD2Q8N7B1 307 aa20.13■□□□□ 0.81
ATG4D-201ENST00000309469 C7orf34Q96L11 122 aa20.13■□□□□ 0.81
ATG4D-201ENST00000309469 RDH12Q96NR8 316 aa20.13■□□□□ 0.81
ATG4D-201ENST00000309469 SOX17Q9H6I2 414 aaPredicted RBP20.13■□□□□ 0.81
ATG4D-201ENST00000309469 EVA1BQ9NVM1 165 aa20.13■□□□□ 0.81
ATG4D-201ENST00000309469 CES1P1Q9UKY3 287 aa20.13■□□□□ 0.81
ATG4D-201ENST00000309469 ANGPT4Q9Y264 503 aa20.13■□□□□ 0.81
ATG4D-201ENST00000309469 MYOCOSA0A1B0GUC4 107 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 MYO1GB0I1T2 1018 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 ERAL1O75616 437 aaKnown RBP20.12■□□□□ 0.81
ATG4D-201ENST00000309469 H6PDO95479 791 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 CSF2P04141 144 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 MAOBP27338 520 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 GPC1P35052 558 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 NCBP2P52298 156 aaKnown RBP eCLIP20.12■□□□□ 0.81
ATG4D-201ENST00000309469 IQCCQ4KMZ1 466 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 CRB2Q5IJ48 1285 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 SLC48A1Q6P1K1 146 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 ZNF761Q86XN6 746 aaPredicted RBP20.12■□□□□ 0.81
ATG4D-201ENST00000309469 ZFP28Q8NHY6 868 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 BAHD1Q8TBE0 780 aaPredicted RBP20.12■□□□□ 0.81
ATG4D-201ENST00000309469 TAMM41Q96BW9 452 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 MAPKAP1Q9BPZ7 522 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 ZFYVE21Q9BQ24 234 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 YIPF3Q9GZM5 350 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 IFT80Q9P2H3 777 aaPredicted RBP20.12■□□□□ 0.81
ATG4D-201ENST00000309469 A0A0J9YY10 115 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 B4DGG1 531 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 P2RX6O15547 441 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 DIRAS1O95057 198 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 CLIC3O95833 236 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 OPN1SWP03999 348 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 SMIM10L1P0DMW3 83 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 PVRP15151 417 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 PRKACGP22612 351 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 PCBP3P57721 371 aaKnown RBP20.12■□□□□ 0.81
ATG4D-201ENST00000309469 USP51Q70EK9 711 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 IQCHQ86VS3 1027 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 CAMKVQ8NCB2 501 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 SMIM10Q96HG1 83 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 GUCD1Q96NT3 240 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 ROGDIQ9GZN7 287 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 A4GALTQ9NPC4 353 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 ZSCAN32Q9NX65 697 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 MYRFQ9Y2G1 1151 aa20.12■□□□□ 0.81
ATG4D-201ENST00000309469 LOC105369274A0A096LPK9 316 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 LOC102723532A0A0G2JNH3 316 aa20.11■□□□□ 0.81
ATG4D-201ENST00000309469 EME2A4GXA9 379 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms