RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 SPINK14Q6IE38 97 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 TRPM8Q7Z2W7 1104 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 OR4N4Q8N0Y3 316 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 SPATA6LQ8N4H0 392 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 SKA2Q8WVK7 121 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 ANKRD49Q8WVL7 239 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 ASZ1Q8WWH4 475 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 LRRC37BQ96QE4 947 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 SLC30A3Q99726 388 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 GATA5Q9BWX5 397 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 NUDT4Q9NZJ9 180 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 CD274Q9NZQ7 290 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 FLNAP21333 2647 aaKnown RBP16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 CCT8L1PA6NM43 557 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 A8MT66 165 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 ZBTB14O43829 449 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 NRP2O60462 931 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 HCFC1P51610 2035 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 EFNA3P52797 238 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 ADAM8P78325 824 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 PLOD1Q02809 727 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 GALNT1Q10472 559 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 DSG2Q14126 1118 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 OR1C1Q15619 314 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 MUM1Q2TAK8 710 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 CCSMST1Q4G0I0 132 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 TMEM205Q6UW68 189 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 BIVMQ86UB2 503 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 CPNE9Q8IYJ1 553 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 EEF1AKMT1Q8WVE0 214 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 ASB5Q8WWX0 329 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 L3HYPDHQ96EM0 354 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 ZNF354BQ96LW1 612 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 RILPQ96NA2 401 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 KCNJ16Q9NPI9 418 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 C14orf105Q9NVL8 296 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 DCTN4Q9UJW0 460 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 RNF6Q9Y252 685 aa16.52■□□□□ 0.24
TRAPPC3-209ENST00000616395 A0A0J9YVX5 310 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 GOLGA8QA0A0J9YX86 632 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 GOLGA8OA6NCC3 632 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 TRPC5OSA6NMA1 111 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 KIAA1324LA8MWY0 1029 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 GOLGA8NF8WBI6 632 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 STX16-NPEPL1H3BU86 382 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 STX16O14662 325 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 ATP5HO75947 161 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 SEC24DO94855 1032 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 C8GP07360 202 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 ENO2P09104 434 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 HIST1H2AGP0C0S8 130 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 MPC1LP0DKB6 136 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 CD46P15529 392 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 HIST1H2ADP20671 130 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 CHRNB4P30926 498 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 RPL14P50914 215 aaKnown RBP16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 HERVK_113P63132 956 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 FASTKQ14296 549 aaKnown RBP16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 GRB7Q14451 532 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 RNFT1Q5M7Z0 435 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 GALNTL5Q7Z4T8 443 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 PRIMA1Q86XR5 153 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 GIMAP7Q8NHV1 300 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 EXT2Q93063 718 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 ZUFSPQ96AP4 578 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 HIST1H2AHQ96KK5 128 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 FOPNLQ96NB1 174 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 HIST1H2AJQ99878 128 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 UTP23Q9BRU9 249 aaKnown RBP16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 H2AFJQ9BTM1 129 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 ERVK-6Q9BXR3 956 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 MED16Q9Y2X0 877 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 HRH3Q9Y5N1 445 aa16.51■□□□□ 0.23
TRAPPC3-209ENST00000616395 IGHV3-20A0A0C4DH32 117 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 SUPT7LO94864 414 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 KITP10721 976 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 ALDH18A1P54886 795 aaKnown RBP16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 TIAL1Q01085 375 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 SP140Q13342 867 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 ACSBG2Q5FVE4 666 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 CDKL4Q5MAI5 379 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 TMEM198Q66K66 360 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 H3F3CQ6NXT2 135 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 TTC23LQ6PF05 361 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 TCAIMQ8N3R3 496 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 TMEM151AQ8N4L1 468 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 PTGR2Q8N8N7 351 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 AMER3Q8N944 861 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 TMEM178AQ8NBL3 297 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 OR6Y1Q8NGX8 325 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 OR2L8Q8NGY9 312 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 PHF21BQ96EK2 531 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 TMEM120AQ9BXJ8 343 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 TGIF2Q9GZN2 237 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 MKL2Q9ULH7 1088 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 CDC14AQ9UNH5 594 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 TRIM33Q9UPN9 1127 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 PLEKHA6Q9Y2H5 1048 aa16.5■□□□□ 0.23
TRAPPC3-209ENST00000616395 ABCA4P78363 2273 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms