RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ZSCAN32Q9NX65 697 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 TAS2R7Q9NYW3 318 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 ACSL6Q9UKU0 697 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 ABCG2Q9UNQ0 655 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 DMTF1Q9Y222 760 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 MAP4K5Q9Y4K4 846 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 MAGED1Q9Y5V3 778 aaPredicted RBP21.53■■□□□ 1.04
CCDC47-204ENST00000582252 SNX8Q9Y5X2 465 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 TMPRSS11DO60235 418 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 BMP10O95393 424 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 TNFP01375 233 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 ARAFP10398 606 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 NUDT1P36639 197 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 DSTNP60981 165 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 CDK6Q00534 326 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 ILF3Q12906 894 aaKnown RBP eCLIP21.52■■□□□ 1.048e-6■■□□□ 11.6
CCDC47-204ENST00000582252 KIR2DS3Q14952 304 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 PRSS53Q2L4Q9 553 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 NADK2Q4G0N4 442 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 ZC3H12BQ5HYM0 836 aaKnown RBP21.52■■□□□ 1.04
CCDC47-204ENST00000582252 ZNF425Q6IV72 752 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 SLC30A9Q6PML9 568 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 GALNT10Q86SR1 603 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 OFCC1Q8IZS5 231 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 C8orf59Q8N0T1 100 aaPredicted RBP21.52■■□□□ 1.04
CCDC47-204ENST00000582252 MMP21Q8N119 569 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 FBXL6Q8N531 539 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 OR4E2Q8NGC2 313 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 OR5AK3PQ8NH89 298 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 ZFPM2Q8WW38 1151 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 DGCR14Q96DF8 476 aaKnown RBP21.52■■□□□ 1.04
CCDC47-204ENST00000582252 NEURL3Q96EH8 262 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 GPR174Q9BXC1 333 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 TMEM168Q9H0V1 697 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 ING2Q9H160 280 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 C6orf106Q9H6K1 298 aaPredicted RBP21.52■■□□□ 1.04
CCDC47-204ENST00000582252 EPS8L2Q9H6S3 715 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 CXorf36Q9H7Y0 433 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 SPHK1Q9NYA1 384 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 PADI2Q9Y2J8 665 aa21.52■■□□□ 1.04
CCDC47-204ENST00000582252 MYO1GB0I1T2 1018 aa21.52■■□□□ 1.03
CCDC47-204ENST00000582252 hCG_2039718K7EN88 272 aa21.52■■□□□ 1.03
CCDC47-204ENST00000582252 CDH2P19022 906 aaPredicted RBP21.52■■□□□ 1.03
CCDC47-204ENST00000582252 SH3BGRP55822 239 aaPredicted RBP21.52■■□□□ 1.03
CCDC47-204ENST00000582252 PCBP4P57723 403 aaKnown RBP21.52■■□□□ 1.03
CCDC47-204ENST00000582252 RPS15AP62244 130 aaKnown RBP21.52■■□□□ 1.03
CCDC47-204ENST00000582252 VLDLRP98155 873 aa21.52■■□□□ 1.03
CCDC47-204ENST00000582252 SAXO2Q658L1 398 aa21.52■■□□□ 1.03
CCDC47-204ENST00000582252 Q6ZSR6 202 aa21.52■■□□□ 1.03
CCDC47-204ENST00000582252 TRIM48Q8IWZ4 208 aa21.52■■□□□ 1.03
CCDC47-204ENST00000582252 OR2L5Q8NG80 312 aa21.52■■□□□ 1.03
CCDC47-204ENST00000582252 NFKBIDQ8NI38 313 aa21.52■■□□□ 1.03
CCDC47-204ENST00000582252 MS4A6EQ96DS6 147 aa21.52■■□□□ 1.03
CCDC47-204ENST00000582252 FAM118AQ9NWS6 357 aa21.52■■□□□ 1.03
CCDC47-204ENST00000582252 ZNF624Q9P2J8 865 aaPredicted RBP21.52■■□□□ 1.03
CCDC47-204ENST00000582252 PCDHGA4Q9Y5G9 962 aa21.52■■□□□ 1.03
CCDC47-204ENST00000582252 LRP4O75096 1905 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 PRAMEF33A0A0G2JMD5 474 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 ZW10O43264 779 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 ERI3O43414 337 aaKnown RBP21.51■■□□□ 1.03
CCDC47-204ENST00000582252 CLIC3O95833 236 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 PDGFBP01127 241 aaPredicted RBP21.51■■□□□ 1.03
CCDC47-204ENST00000582252 PAX7P23759 505 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 RPS6KA3P51812 740 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 IL18R1Q13478 541 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 PLCL1Q15111 1095 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 ALG11Q2TAA5 492 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 SPDYE7PQ495Y7 208 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 TOR1AIP1Q5JTV8 583 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 TPRG1LQ5T0D9 272 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 KIAA1614Q5VZ46 1190 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 BORAQ6PGQ7 559 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 THAP5Q7Z6K1 395 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 ABI3BPQ7Z7G0 1075 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 TMEM179BQ7Z7N9 219 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 RLN3Q8WXF3 142 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 EXOSC8Q96B26 276 aaKnown RBP21.51■■□□□ 1.03
CCDC47-204ENST00000582252 TEFMQ96QE5 360 aaKnown RBP21.51■■□□□ 1.03
CCDC47-204ENST00000582252 ZNF347Q96SE7 839 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 TRIM4Q9C037 500 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 PCED1AQ9H1Q7 454 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 KLF15Q9UIH9 416 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 DGKBQ9Y6T7 804 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 U3KQV3 271 aa21.51■■□□□ 1.03
CCDC47-204ENST00000582252 EME2A4GXA9 379 aaPredicted RBP21.5■■□□□ 1.03
CCDC47-204ENST00000582252 TRIM64A6NGJ6 449 aa21.5■■□□□ 1.03
CCDC47-204ENST00000582252 K7ESF4 209 aa21.5■■□□□ 1.03
CCDC47-204ENST00000582252 IGHV4-34P06331 123 aa21.5■■□□□ 1.03
CCDC47-204ENST00000582252 HIST1H1TP22492 207 aaPredicted RBP21.5■■□□□ 1.03
CCDC47-204ENST00000582252 AQP1P29972 269 aa21.5■■□□□ 1.03
CCDC47-204ENST00000582252 NTSP30990 170 aa21.5■■□□□ 1.03
CCDC47-204ENST00000582252 PXNP49023 591 aaPredicted RBP21.5■■□□□ 1.03
CCDC47-204ENST00000582252 KCNJ10P78508 379 aa21.5■■□□□ 1.03
CCDC47-204ENST00000582252 CNPY1Q3B7I2 92 aa21.5■■□□□ 1.03
CCDC47-204ENST00000582252 IFI44LQ53G44 452 aa21.5■■□□□ 1.03
CCDC47-204ENST00000582252 CRB2Q5IJ48 1285 aa21.5■■□□□ 1.03
CCDC47-204ENST00000582252 ZC3H7AQ8IWR0 971 aaKnown RBP21.5■■□□□ 1.03
CCDC47-204ENST00000582252 HS3ST5Q8IZT8 346 aa21.5■■□□□ 1.03
CCDC47-204ENST00000582252 METTL25Q8N6Q8 603 aa21.5■■□□□ 1.03
CCDC47-204ENST00000582252 MUS81Q96NY9 551 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms