RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 CALB2P22676 271 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 S100A3P33764 101 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 KIR3DL1P43629 444 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 ZFP36L2P47974 494 aaKnown RBP10.14□□□□□ -0.79
SS18-213ENST00000579640 MNAT1P51948 309 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 CLDN6P56747 220 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 OLR1P78380 273 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 LRRC74AQ0VAA2 488 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 UGT8Q16880 541 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 FAM174BQ3ZCQ3 159 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 COQ5Q5HYK3 327 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 TMEM164Q5U3C3 297 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 PRAMEF17Q5VTA0 474 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 OR52E8Q6IFG1 317 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 GK5Q6ZS86 529 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 MED25Q71SY5 747 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 SNX32Q86XE0 403 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 DSELQ8IZU8 1212 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 OR8J2Q8NGG1 315 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 OR5T3Q8NGG3 340 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 PPCDCQ96CD2 204 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 COQ8BQ96D53 544 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 NSL1Q96IY1 281 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 GBP5Q96PP8 586 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 CTRCQ99895 268 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 DPH2Q9BQC3 489 aaPredicted RBP10.14□□□□□ -0.79
SS18-213ENST00000579640 BHLHE41Q9C0J9 482 aaPredicted RBP10.14□□□□□ -0.79
SS18-213ENST00000579640 TAS2R7Q9NYW3 318 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 PISDQ9UG56 409 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 PSME2Q9UL46 239 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 EXO1Q9UQ84 846 aaKnown RBP10.14□□□□□ -0.79
SS18-213ENST00000579640 MAP4K5Q9Y4K4 846 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 WDR87Q6ZQQ6 2873 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 ANGPT2O15123 496 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 HNRNPCL1O60812 293 aaKnown RBP10.14□□□□□ -0.79
SS18-213ENST00000579640 ATP5HO75947 161 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 TIAF1O95411 115 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 ESRRAP11474 423 aaPredicted RBP10.14□□□□□ -0.79
SS18-213ENST00000579640 ITIH1P19827 911 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 PPP2R1BP30154 601 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 ALDH9A1P49189 494 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 MAPK10P53779 464 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 DCDP81605 110 aaKnown RBP10.14□□□□□ -0.79
SS18-213ENST00000579640 SHC2P98077 582 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 MC1RQ01726 317 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 ACTN3Q08043 901 aaPredicted RBP10.14□□□□□ -0.79
SS18-213ENST00000579640 ABHD18Q0P651 414 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 TARDBPQ13148 414 aaKnown RBP eCLIP10.14□□□□□ -0.792e-8■■□□□ 13.7
SS18-213ENST00000579640 SPANXN4Q5MJ08 99 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 ARHGAP40Q5TG30 622 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 ANXA8L1Q5VT79 327 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 SLC48A1Q6P1K1 146 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 CCDC121Q6ZUS5 278 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 TICAM1Q8IUC6 712 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 SAMD14Q8IZD0 417 aaPredicted RBP10.14□□□□□ -0.79
SS18-213ENST00000579640 C7orf57Q8NEG2 295 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 VPS37AQ8NEZ2 397 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 OR51Q1Q8NH59 317 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 TANKQ92844 425 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 COL26A1Q96A83 441 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 OR1F2PQ96R84 312 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 DUSP26Q9BV47 211 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 RPF2Q9H7B2 306 aaKnown RBP10.14□□□□□ -0.79
SS18-213ENST00000579640 RMND5AQ9H871 391 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 ARL8BQ9NVJ2 186 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 FAM120CQ9NX05 1096 aaKnown RBP10.14□□□□□ -0.79
SS18-213ENST00000579640 SH3BP4Q9P0V3 963 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 HCN3Q9P1Z3 774 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 LEF1Q9UJU2 399 aaPredicted RBP10.14□□□□□ -0.79
SS18-213ENST00000579640 NDUFAF1Q9Y375 327 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 PCDHGA8Q9Y5G5 932 aa10.14□□□□□ -0.79
SS18-213ENST00000579640 LOC100653049A0A140TA62 436 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 CYR61O00622 381 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 KRT34O76011 436 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 KIAA0754O94854 1291 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 NTRK1P04629 796 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 KLK3P07288 261 aaPredicted RBP10.13□□□□□ -0.79
SS18-213ENST00000579640 CAPN3P20807 821 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 AGXTP21549 392 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 RORAP35398 523 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 ETV5P41161 510 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 OR1D4P47884 311 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 BNIP1Q12981 228 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 ZSCAN26Q16670 478 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 PGS1Q32NB8 556 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 MMEL1Q495T6 779 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 VPS26BQ4G0F5 336 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 TIGD2Q4W5G0 525 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 C1orf189Q5VU69 101 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 ZNF385CQ66K41 422 aaPredicted RBP10.13□□□□□ -0.79
SS18-213ENST00000579640 C18orf63Q68DL7 685 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 RIPOR1Q6ZS17 1223 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 TMPRSS7Q7RTY8 843 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 ZNF595Q8IYB9 648 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 DTWD1Q8N5C7 304 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 METTL27Q8N6F8 245 aaPredicted RBP10.13□□□□□ -0.79
SS18-213ENST00000579640 FAM47BQ8NA70 645 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 PCYOX1LQ8NBM8 494 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 OR7A2PQ8NGA2 310 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 TBC1D20Q96BZ9 403 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms