RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 GALNTL5Q7Z4T8 443 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 RPS19BP1Q86WX3 136 aaKnown RBP14.91□□□□□ -0.02
LMX1B-204ENST00000561065 MYLK4Q86YV6 388 aaPredicted RBP14.91□□□□□ -0.02
LMX1B-204ENST00000561065 ARMC10Q8N2F6 343 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 RNF175Q8N4F7 328 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 DCAKDQ8WVC6 231 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 CMTM7Q96FZ5 175 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 SERINC2Q96SA4 455 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 TBCDQ9BTW9 1192 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 TSPAN10Q9H1Z9 355 aaPredicted RBP14.91□□□□□ -0.02
LMX1B-204ENST00000561065 MRPL46Q9H2W6 279 aaKnown RBP14.91□□□□□ -0.02
LMX1B-204ENST00000561065 PRDM7Q9NQW5 492 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 PRTFDC1Q9NRG1 225 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 CSMD1Q96PZ7 3565 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 TRBV11-1A0A0K0K1C0 115 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 STX16-NPEPL1H3BU86 382 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 RTCAO00442 366 aaKnown RBP14.9□□□□□ -0.02
LMX1B-204ENST00000561065 CDK2AP1O14519 115 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 STX16O14662 325 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 KLK8O60259 260 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 PRKNO60260 465 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-204ENST00000561065 PTX3P26022 381 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-204ENST00000561065 ARL1P40616 181 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-204ENST00000561065 PIK3CBP42338 1070 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 MAGEA12P43365 314 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 ARFIP1P53367 373 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 MTTPP55157 894 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 OC90Q02509 493 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-204ENST00000561065 GTF2H2Q13888 395 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 ZRSR2Q15696 482 aaKnown RBP14.9□□□□□ -0.02
LMX1B-204ENST00000561065 GTF2H2CQ6P1K8 395 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 CLNKQ7Z7G1 428 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 SIAH3Q8IW03 269 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 B3GNT7Q8NFL0 401 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 DNAJB8Q8NHS0 232 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 ZNF473Q8WTR7 871 aaKnown RBP14.9□□□□□ -0.02
LMX1B-204ENST00000561065 IPPKQ9H8X2 491 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 LRFN1Q9P244 771 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 PSMC3IPQ9P2W1 217 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-204ENST00000561065 SEC14L3Q9UDX4 400 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 DCDC2Q9UHG0 476 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 DAPP1Q9UN19 280 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 PPIEQ9UNP9 301 aaKnown RBP14.9□□□□□ -0.02
LMX1B-204ENST00000561065 TSC22D4Q9Y3Q8 395 aa14.9□□□□□ -0.02
LMX1B-204ENST00000561065 MYOCOSA0A1B0GUC4 107 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 LRRC14BA6NHZ5 514 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 SH3BGRLO75368 114 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 SLC25A12O75746 678 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 CLDN9O95484 217 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 PCNAP12004 261 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 TNFRSF8P28908 595 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 GPR143P51810 404 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 CCNG1P51959 295 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 HSD17B7P56937 341 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 BIKQ13323 160 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 TERF2Q15554 542 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 TECRLQ5HYJ1 363 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 RNFT1Q5M7Z0 435 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 GRHL2Q6ISB3 625 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 LAS2Q8IYD9 372 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 THAP3Q8WTV1 239 aaPredicted RBP14.89□□□□□ -0.03
LMX1B-204ENST00000561065 UBLCP1Q8WVY7 318 aaPredicted RBP14.89□□□□□ -0.03
LMX1B-204ENST00000561065 RELTQ969Z4 430 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 GPR78Q96P69 363 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 TRIM45Q9H8W5 580 aaPredicted RBP14.89□□□□□ -0.03
LMX1B-204ENST00000561065 PNO1Q9NRX1 252 aaKnown RBP14.89□□□□□ -0.03
LMX1B-204ENST00000561065 PSD3Q9NYI0 1048 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 KCMF1Q9P0J7 381 aa14.89□□□□□ -0.03
LMX1B-204ENST00000561065 PCNX1Q96RV3 2341 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 TMEM200CA6NKL6 621 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 ZNHIT1O43257 154 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 NME2P1O60361 137 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 SP1P08047 785 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 GSTA1P08263 222 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 CD46P15529 392 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 NME2P22392 152 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 EEF1DP29692 281 aaKnown RBP14.88□□□□□ -0.03
LMX1B-204ENST00000561065 TLX1P31314 330 aaPredicted RBP14.88□□□□□ -0.03
LMX1B-204ENST00000561065 TRHRP34981 398 aaPredicted RBP14.88□□□□□ -0.03
LMX1B-204ENST00000561065 CCT5P48643 541 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 PER3P56645 1201 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 SLC13A2Q13183 592 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 C16orf47Q6ZP98 133 aaPredicted RBP14.88□□□□□ -0.03
LMX1B-204ENST00000561065 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.88□□□□□ -0.03
LMX1B-204ENST00000561065 ZNF595Q8IYB9 648 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 PTGR2Q8N8N7 351 aaPredicted RBP14.88□□□□□ -0.03
LMX1B-204ENST00000561065 TMEM178AQ8NBL3 297 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 OR7G3Q8NG95 312 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 NCLNQ969V3 563 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 RGMAQ96B86 450 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 PHF21BQ96EK2 531 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 GPR137Q96N19 417 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 MAPKAP1Q9BPZ7 522 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 SORBS1Q9BX66 1292 aaKnown RBP14.88□□□□□ -0.03
LMX1B-204ENST00000561065 ADAP2Q9NPF8 381 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 NMRK1Q9NWW6 199 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 MS4A12Q9NXJ0 267 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 AHSPQ9NZD4 102 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 SH3BGRL2Q9UJC5 107 aa14.88□□□□□ -0.03
LMX1B-204ENST00000561065 EML6Q6ZMW3 1958 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms