RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 TEX35Q5T0J7 233 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 SPOUT1Q5T280 376 aaKnown RBP3.91□□□□□ -1.78
TRAV15-201ENST00000556680 GRTP1Q5TC63 336 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 C9orf57Q5W0N0 161 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 ZNF324BQ6AW86 544 aaPredicted RBP3.91□□□□□ -1.78
TRAV15-201ENST00000556680 SPSB3Q6PJ21 355 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 DCLRE1AQ6PJP8 1040 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 SUSD1Q6UWL2 747 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 DGLUCYQ7Z3D6 616 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 SPATA21Q7Z572 469 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 DEFB128Q7Z7B8 93 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 ZNF677Q86XU0 584 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 FAM71AQ8IYT1 594 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 CRYBG2Q8N1P7 616 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 ARHGAP24Q8N264 748 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 ZNF611Q8N823 705 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 POC1AQ8NBT0 407 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 TRIM58Q8NG06 486 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 OR13A1Q8NGR1 328 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 GOT1L1Q8NHS2 421 aaPredicted RBP3.91□□□□□ -1.78
TRAV15-201ENST00000556680 CD101Q93033 1021 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 EXT2Q93063 718 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 SPSB1Q96BD6 273 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 MARK4Q96L34 752 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 PSMB7Q99436 277 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 FEVQ99581 238 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 MGME1Q9BQP7 344 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 C11orf70Q9BRQ4 267 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 CARD6Q9BX69 1037 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 THAP2Q9H0W7 228 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 CXCL16Q9H2A7 254 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 RETREG1Q9H6L5 497 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 DDX31Q9H8H2 851 aaKnown RBP3.91□□□□□ -1.78
TRAV15-201ENST00000556680 EVA1AQ9H8M9 152 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 MYNNQ9NPC7 610 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 KLHL1Q9NR64 748 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 FAM49BQ9NUQ9 324 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 CACNG4Q9UBN1 327 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 RASAL2Q9UJF2 1139 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 RNF150Q9ULK6 438 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 PACSIN2Q9UNF0 486 aaPredicted RBP3.91□□□□□ -1.78
TRAV15-201ENST00000556680 FAF1Q9UNN5 650 aaPredicted RBP3.91□□□□□ -1.78
TRAV15-201ENST00000556680 C2CD2Q9Y426 696 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 JRKLQ9Y4A0 524 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 HYOU1Q9Y4L1 999 aa3.91□□□□□ -1.78
TRAV15-201ENST00000556680 V9GYY5 206 aaPredicted RBP3.91□□□□□ -1.78
TRAV15-201ENST00000556680 COL4A4P53420 1690 aaPredicted RBP3.9□□□□□ -1.78
TRAV15-201ENST00000556680 NYNRINQ9P2P1 1898 aaKnown RBP3.9□□□□□ -1.78
TRAV15-201ENST00000556680 SRCAPQ6ZRS2 3230 aa3.9□□□□□ -1.78
TRAV15-201ENST00000556680 IGKV2D-30A0A075B6S6 120 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 IGLV5-45A0A087WSX0 123 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 TRAV34A0A0B4J273 112 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 SMIM28A0A1B0GU29 152 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 A0A1W2PPQ1 181 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 A0A1W2PRB8 838 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 ARL5CA6NH57 179 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 ANXA2P2A6NMY6 339 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 KPNA7A9QM74 516 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 PRAC2D3DTV9 90 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 C16orf97H3BN30 126 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 CYB561D2O14569 222 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 PTGESO14684 152 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 CAPN9O14815 690 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 SPOPO43791 374 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 SYNCRIPO60506 623 aaKnown RBP3.9□□□□□ -1.79
TRAV15-201ENST00000556680 ATP1A1P05023 1023 aaKnown RBP3.9□□□□□ -1.79
TRAV15-201ENST00000556680 CALB1P05937 261 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 SNRNP70P08621 437 aaKnown RBP3.9□□□□□ -1.79
TRAV15-201ENST00000556680 CTAGE8P0CG41 777 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 FGF3P11487 239 aaPredicted RBP3.9□□□□□ -1.79
TRAV15-201ENST00000556680 ODC1P11926 461 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 PLA2G2AP14555 144 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 ADORA2BP29275 332 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 HOXC13P31276 330 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 CA8P35219 290 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 OR1G1P47890 313 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 HOXA1P49639 335 aaPredicted RBP3.9□□□□□ -1.79
TRAV15-201ENST00000556680 NDST1P52848 882 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 MAPK12P53778 367 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 POLR2LP62875 67 aaKnown RBP3.9□□□□□ -1.79
TRAV15-201ENST00000556680 CKAP4Q07065 602 aaKnown RBP3.9□□□□□ -1.79
TRAV15-201ENST00000556680 MZT1Q08AG7 82 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 PNRC1Q12796 327 aaPredicted RBP3.9□□□□□ -1.79
TRAV15-201ENST00000556680 GAGE5Q13069 117 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 GAGE6Q13070 117 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 MFAP5Q13361 173 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 GOLGA7BQ2TAP0 167 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 C2CD6Q53TS8 623 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 CYP4A22Q5TCH4 519 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 SEL1L2Q5TEA6 688 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 PPP1R2P3Q6NXS1 205 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 DNAJC24Q6P3W2 148 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 TRAT1Q6PIZ9 186 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 ZNF852Q6ZMS4 543 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 PEX26Q7Z412 305 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 DSG4Q86SJ6 1040 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 ACOT1Q86TX2 421 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 ERICH1Q86X53 443 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 ECHDC2Q86YB7 292 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 CTAGE4Q8IX94 777 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms