RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	LCLAT1	Q6UWP7	414 aa		3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	C3P1	Q6ZMU1	363 aa		3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	C1orf186	Q6ZWK4	172 aa		3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	GET4	Q7L5D6	327 aa	Predicted RBP	3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	WDR49	Q8IV35	697 aa		3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	AQP11	Q8NBQ7	271 aa		3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	OR52E1	Q8NGJ3	308 aa		3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	OR10G7	Q8NGN6	311 aa		3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	OR4L1	Q8NH43	312 aa		3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	LIPH	Q8WWY8	451 aa		3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	SLCO4A1	Q96BD0	722 aa		3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	POM121L2	Q96KW2	1035 aa		3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	RUFY1	Q96T51	708 aa		3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	OPRPN	Q99935	248 aa	Predicted RBP	3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	UPF3A	Q9H1J1	476 aa	Known RBP	3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	MARCH7	Q9H992	704 aa		3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	DDX28	Q9NUL7	540 aa	Known RBP	3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	THEG	Q9P2T0	379 aa		3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	TEKT2	Q9UIF3	430 aa		3.92	□□□□□ -1.78
KTN1-223	ENST00000555573	LOC105371242	A0A075B767	164 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	TRBV2	A0A0J9YWF9	115 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	MACROD2	A1Z1Q3	448 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	TNFSF12	O43508	249 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	MTRF1	O75570	445 aa	Known RBP	3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	CT45A8	P0DMV1	189 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	CT45A9	P0DMV2	189 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	AHCY	P23526	432 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	MT3	P25713	68 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	STIP1	P31948	543 aa	Known RBP	3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	CLK1	P49759	484 aa	Known RBP	3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	NDST2	P52849	883 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	SRP54	P61011	504 aa	Known RBP	3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	HERV-K104	P63124	156 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	CALCOCO2	Q13137	446 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	TSTA3	Q13630	321 aa	Predicted RBP	3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	MEF2D	Q14814	521 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	RFTN2	Q52LD8	501 aa	Predicted RBP	3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	CT45A2	Q5DJT8	189 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	ZC2HC1B	Q5TFG8	222 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	EXOC6	Q8TAG9	804 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	PCED1B	Q96HM7	432 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	FGFBP2	Q9BYJ0	223 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	WWP1	Q9H0M0	922 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	ABCG4	Q9H172	646 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	ABCG8	Q9H221	673 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	CXXC4	Q9H2H0	198 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	UBE2T	Q9NPD8	197 aa	Predicted RBP	3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	TECR	Q9NZ01	308 aa	Known RBP	3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	NDUFA13	Q9P0J0	144 aa		3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	RPH3A	Q9Y2J0	694 aa	Predicted RBP	3.91	□□□□□ -1.78
KTN1-223	ENST00000555573	IGHV3-38	A0A0C4DH36	116 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	SH3PXD2B	A1X283	911 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	ARHGEF9	O43307	516 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	HSF2BP	O75031	334 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	SLC4A1	P02730	911 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	TPBGL	P0DKB5	382 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	FHIT	P49789	147 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	HNRNPF	P52597	415 aa	Known RBP	3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	TMEM50B	P56557	158 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	STARD6	P59095	220 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	HILS1	P60008	231 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	KRTAP10-7	P60409	375 aa	Predicted RBP	3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	IRX1	P78414	480 aa	Predicted RBP	3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	PPP1R8	Q12972	351 aa	Known RBP	3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	GCKR	Q14397	625 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	OR1C1	Q15619	314 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	FASTKD1	Q53R41	847 aa	Known RBP	3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	NEPRO	Q6NW34	567 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	GDPGP1	Q6ZNW5	385 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	ADAMTSL2	Q86TH1	951 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	LRRTM1	Q86UE6	522 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	OR4N5	Q8IXE1	308 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	ZNF619	Q8N2I2	560 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	CCNY	Q8ND76	341 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	TMEM185A	Q8NFB2	350 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	OR52B6	Q8NGF0	335 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	SLC13A3	Q8WWT9	602 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	ZNF577	Q9BSK1	485 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	SPX	Q9BT56	116 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	SYT11	Q9BT88	431 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	PINK1	Q9BXM7	581 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	TNMD	Q9H2S6	317 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	KCNK13	Q9HB14	408 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	PLEKHA3	Q9HB20	300 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	SYTL2	Q9HCH5	934 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	ZDHHC18	Q9NUE0	388 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	ACOXL	Q9NUZ1	547 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	NDE1	Q9NXR1	346 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	TRIM10	Q9UDY6	481 aa		3.9	□□□□□ -1.78
KTN1-223	ENST00000555573	CCS	O14618	274 aa		3.9	□□□□□ -1.79
KTN1-223	ENST00000555573	INPP4B	O15327	924 aa		3.9	□□□□□ -1.79
KTN1-223	ENST00000555573	CS	O75390	466 aa	Known RBP	3.9	□□□□□ -1.79
KTN1-223	ENST00000555573	TXNDC12	O95881	172 aa		3.9	□□□□□ -1.79
KTN1-223	ENST00000555573	NSF	P46459	744 aa	Known RBP	3.9	□□□□□ -1.79
KTN1-223	ENST00000555573	GEM	P55040	296 aa		3.9	□□□□□ -1.79
KTN1-223	ENST00000555573	KIAA0141	Q14154	515 aa	Predicted RBP	3.9	□□□□□ -1.79
KTN1-223	ENST00000555573	FASTKD3	Q14CZ7	662 aa	Known RBP	3.9	□□□□□ -1.79
KTN1-223	ENST00000555573	MLF2	Q15773	248 aa	Predicted RBP	3.9	□□□□□ -1.79
KTN1-223	ENST00000555573	MRGPRG-AS1	Q2M3A8	158 aa		3.9	□□□□□ -1.79

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