RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 CPN2P22792 545 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 RFC3P40938 356 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 GPR143P51810 404 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 RAP1GDS1P52306 607 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 HSF1Q00613 529 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 E2F2Q14209 437 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 SETDB1Q15047 1291 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 ACAP2Q15057 778 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 ELAVL1Q15717 326 aaKnown RBP13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 C3AR1Q16581 482 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 TMEM35AQ53FP2 167 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 KRTCAP3Q53RY4 240 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 RNFT1Q5M7Z0 435 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 KHDRBS2Q5VWX1 349 aaKnown RBP13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 KLC3Q6P597 504 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 CYP4Z2PQ8N1L4 340 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 TMEM132CQ8N3T6 1108 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 NOA1Q8NC60 698 aaKnown RBP13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 HUS1BQ8NHY5 278 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 RHEBL1Q8TAI7 183 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 IFT81Q8WYA0 676 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 CMTM7Q96FZ5 175 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 MTERF1Q99551 399 aaKnown RBP13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 CDC42EP4Q9H3Q1 356 aaKnown RBP13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 ACSS3Q9H6R3 686 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 TRIM45Q9H8W5 580 aaPredicted RBP13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 ACTR8Q9H981 624 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 LYRM4Q9HD34 91 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 DMGDHQ9UI17 866 aaKnown RBP13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 PPIEQ9UNP9 301 aaKnown RBP13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 SPACA6W5XKT8 324 aa13.31□□□□□ -0.28
RTN3P1-201ENST00000536295 UNC79Q9P2D8 2635 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 ARHGAP10A1A4S6 786 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 CDK2AP1O14519 115 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 ASNA1O43681 348 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 ZFAND5O76080 213 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 ESRRAP11474 423 aaPredicted RBP13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 SERPINB1P30740 379 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 MEOX1P50221 254 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 SSR4P51571 173 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 ALDH18A1P54886 795 aaKnown RBP13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 GPR85P60893 370 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 NAA30Q147X3 362 aaPredicted RBP13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 OR4C11Q6IEV9 310 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 GOLGA7Q7Z5G4 137 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 CCDC91Q7Z6B0 441 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 MRGPRGQ86SM5 289 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 SIAH3Q8IW03 269 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 SULF2Q8IWU5 870 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 ARMC10Q8N2F6 343 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 MMGT1Q8N4V1 131 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 ZNF321PQ8N8H1 164 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 PTPMT1Q8WUK0 201 aaPredicted RBP13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 ITLN2Q8WWU7 325 aaPredicted RBP13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 DAZLQ92904 295 aaKnown RBP13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 OR8D2Q9GZM6 311 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 ERVK-11Q9UQG0 969 aa13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 KLF13Q9Y2Y9 288 aaPredicted RBP13.3□□□□□ -0.28
RTN3P1-201ENST00000536295 C17orf105B2RV13 164 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 WWP2O00308 870 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 PEX1O43933 1283 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 OR2J2O76002 312 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 SIX3O95343 332 aaPredicted RBP13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 INHBAP08476 426 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 ABOP16442 354 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 ARL1P40616 181 aaPredicted RBP13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 RPS13P62277 151 aaKnown RBP13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 PCDH1Q08174 1060 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 SLAMF1Q13291 335 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 GTF2H2Q13888 395 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 SERTAD2Q14140 314 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 CPSF6Q16630 551 aaKnown RBP eCLIP13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 DEPDC1Q5TB30 811 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 GTF2H2CQ6P1K8 395 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 MTFR2Q6P444 385 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 HSDL2Q6YN16 418 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 CEP128Q6ZU80 1094 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 MDGA2Q7Z553 956 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 SPPL2CQ8IUH8 684 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 OR4N5Q8IXE1 308 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 PLD6Q8N2A8 252 aaKnown RBP13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 GHDCQ8N2G8 530 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 MORN4Q8NDC4 146 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 OR14A16Q8NHC5 309 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 UHMK1Q8TAS1 419 aaKnown RBP13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 ASB15Q8WXK1 588 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 RGMAQ96B86 450 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 SCYL1Q96KG9 808 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 GPR78Q96P69 363 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 FMO2Q99518 471 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 CENPKQ9BS16 269 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 IPPKQ9H8X2 491 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 DMRT3Q9NQL9 472 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 ZNF358Q9NW07 568 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 VTI1BQ9UEU0 232 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 YARS2Q9Y2Z4 477 aaKnown RBP13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 IKBKGQ9Y6K9 419 aa13.29□□□□□ -0.28
RTN3P1-201ENST00000536295 SYNDIG1LA6NDD5 238 aa13.28□□□□□ -0.28
RTN3P1-201ENST00000536295 TMEM200CA6NKL6 621 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms