RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 KRTCAP3Q53RY4 240 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 EXOSC6Q5RKV6 272 aaKnown RBP8.4□□□□□ -1.06
HLA-B-253ENST00000481849 PAOXQ6QHF9 649 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 QSOX2Q6ZRP7 698 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 SIAH3Q8IW03 269 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.4□□□□□ -1.06
HLA-B-253ENST00000481849 SPATA6LQ8N4H0 392 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 ADAMTS18Q8TE60 1221 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 CREB3L4Q8TEY5 395 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 AGAP11Q8TF27 550 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 ANKRD49Q8WVL7 239 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 PDLIM2Q96JY6 352 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 FAR2Q96K12 515 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 SARGQ9BW04 601 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 DEFB126Q9BYW3 111 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 AICDAQ9GZX7 198 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 LIN28AQ9H9Z2 209 aaKnown RBP8.4□□□□□ -1.06
HLA-B-253ENST00000481849 PELI2Q9HAT8 420 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 CHST11Q9NPF2 352 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 FBXW2Q9UKT8 454 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 MEMO1Q9Y316 297 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 PCDHGB6Q9Y5F9 930 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 TEX264Q9Y6I9 313 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 KCNE2Q9Y6J6 123 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 IGKV3D-11A0A0A0MRZ8 115 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 LOC100289279A0A1B0GTE1 492 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 TCRBV16S1A1N1A0A5B0 115 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 FCHO1O14526 889 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 ZSCAN12O43309 604 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 ERI3O43414 337 aaKnown RBP8.39□□□□□ -1.07
HLA-B-253ENST00000481849 DRD2P14416 443 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 MEOX1P50221 254 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 PLA2G16P53816 162 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 ARL4CP56559 192 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 TAS2R39P59534 338 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 GPR85P60893 370 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 MRPS25P82663 173 aaKnown RBP8.39□□□□□ -1.07
HLA-B-253ENST00000481849 MGAT5Q09328 741 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 PDIA2Q13087 525 aaKnown RBP8.39□□□□□ -1.07
HLA-B-253ENST00000481849 RUNX2Q13950 521 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 SLBPQ14493 270 aaKnown RBP eCLIP8.39□□□□□ -1.07
HLA-B-253ENST00000481849 TSNQ15631 228 aaKnown RBP8.39□□□□□ -1.07
HLA-B-253ENST00000481849 FBXO48Q5FWF7 155 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 STEAP4Q687X5 459 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 NIPAL1Q6NVV3 410 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 XKRXQ6PP77 449 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 C16orf47Q6ZP98 133 aaPredicted RBP8.39□□□□□ -1.07
HLA-B-253ENST00000481849 GDF7Q7Z4P5 450 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 FGD2Q7Z6J4 655 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 CLNKQ7Z7G1 428 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 GALNT7Q86SF2 657 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 ZNF227Q86WZ6 799 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 DOLPP1Q86YN1 238 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 CEP97Q8IW35 865 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 GHDCQ8N2G8 530 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 NKAPQ8N5F7 415 aaKnown RBP8.39□□□□□ -1.07
HLA-B-253ENST00000481849 FAM47BQ8NA70 645 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 TMEM52Q8NDY8 209 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 FBXO36Q8NEA4 188 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 NFAM1Q8NET5 270 aaPredicted RBP8.39□□□□□ -1.07
HLA-B-253ENST00000481849 TRPV3Q8NET8 790 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 SLCO2A1Q92959 643 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 TMEM125Q96AQ2 219 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 CAB39LQ9H9S4 337 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 CTNNAL1Q9UBT7 734 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 ITGB1BP2Q9UKP3 347 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 CORO1CQ9ULV4 474 aaPredicted RBP8.39□□□□□ -1.07
HLA-B-253ENST00000481849 ZNF835Q9Y2P0 537 aa8.39□□□□□ -1.07
HLA-B-253ENST00000481849 A0A1B0GTH9 108 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 USP27XA6NNY8 438 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 CES2O00748 559 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 PRRG2O14669 202 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 TFECO14948 347 aaPredicted RBP8.38□□□□□ -1.07
HLA-B-253ENST00000481849 HS6ST1O60243 411 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 EIF4EBP3O60516 100 aaPredicted RBP8.38□□□□□ -1.07
HLA-B-253ENST00000481849 H2AFYO75367 372 aaKnown RBP8.38□□□□□ -1.07
HLA-B-253ENST00000481849 PDE9AO76083 593 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 CLDN14O95500 239 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 F13BP05160 661 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 TPOP07202 933 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 SERPINA6P08185 405 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 SMIM10L1P0DMW3 83 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 C1GALT1C1LP0DN25 315 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 TCP1P17987 556 aaKnown RBP8.38□□□□□ -1.07
HLA-B-253ENST00000481849 HNRNPH1P31943 449 aaKnown RBP8.38□□□□□ -1.07
HLA-B-253ENST00000481849 PTGER4P35408 488 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 HLCSP50747 726 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 SLC12A2P55011 1212 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 STXBP1P61764 594 aaKnown RBP8.38□□□□□ -1.07
HLA-B-253ENST00000481849 SLC13A2Q13183 592 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 ADNP2Q6IQ32 1131 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 TMIGD1Q6UXZ0 262 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 Q6ZPB1 254 aaPredicted RBP8.38□□□□□ -1.07
HLA-B-253ENST00000481849 ZC3HC1Q86WB0 502 aaKnown RBP8.38□□□□□ -1.07
HLA-B-253ENST00000481849 SULF2Q8IWU5 870 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 ZBED8Q8IZ13 594 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 LGI4Q8N135 537 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 CYP4Z2PQ8N1L4 340 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 TMEM156Q8N614 296 aa8.38□□□□□ -1.07
HLA-B-253ENST00000481849 SNX31Q8N9S9 440 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms