RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 ERVK-11Q9UQG0 969 aa8.74□□□□□ -1.01
SMARCE1-210ENST00000481231 SLC22A14Q9Y267 594 aa8.74□□□□□ -1.01
SMARCE1-210ENST00000481231 VWA7Q9Y334 891 aa8.74□□□□□ -1.01
SMARCE1-210ENST00000481231 FAM215AQ9Y5M1 114 aa8.74□□□□□ -1.01
SMARCE1-210ENST00000481231 KCNE2Q9Y6J6 123 aa8.74□□□□□ -1.01
SMARCE1-210ENST00000481231 A0A1W2PPR1 153 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 NPEPPSL1A6NEC2 478 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 G3V3Y1 287 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 PGRMC1O00264 195 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 CDC7O00311 574 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 ERI3O43414 337 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 OR2J2O76002 312 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 ZFAND5O76080 213 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 OR6B1O95007 311 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 F12P00748 615 aaPredicted RBP8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 SAT1P21673 171 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 ACVR2AP27037 513 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 HNRNPH1P31943 449 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 FNTAP49354 379 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 STXBP1P61764 594 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 PPIAP62937 165 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 POU4F3Q15319 338 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 SLC25A35Q3KQZ1 300 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 BBS9Q3SYG4 887 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 GXYLT1Q4G148 440 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 XKR6Q5GH73 641 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 TEDDM1Q5T9Z0 273 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 RTL6Q6ICC9 239 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 ZNF585AQ6P3V2 769 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 TRMT10BQ6PF06 316 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 FAM47BQ8NA70 645 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 OR2M7Q8NG81 312 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 FAM222BQ8WU58 562 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 GAL3ST3Q96A11 431 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 PDLIM5Q96HC4 596 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 NAP1L3Q99457 506 aaPredicted RBP8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 CCDC77Q9BR77 488 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 WDR83Q9BRX9 315 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 NAT9Q9BTE0 207 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 ZDHHC11Q9H8X9 412 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 LIN28AQ9H9Z2 209 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 ADAP2Q9NPF8 381 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 PPANQ9NQ55 473 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 PRTFDC1Q9NRG1 225 aa8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 CORO1CQ9ULV4 474 aaPredicted RBP8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 YARS2Q9Y2Z4 477 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-210ENST00000481231 SONP18583 2426 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 LRIT2A6NDA9 550 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 A8MVJ9 347 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 WWP2O00308 870 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 DNALI1O14645 258 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 GLSO94925 669 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 NID1P14543 1247 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 ZNF37AP17032 561 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 SOX3P41225 446 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 SLC6A12P48065 614 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 HSD17B7P56937 341 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 RAB38P57729 211 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 CCZ1BP86790 482 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 CCZ1P86791 482 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 PLGLB1Q02325 96 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 SLC13A2Q13183 592 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 SLBPQ14493 270 aaKnown RBP eCLIP8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 DAZAP2Q15038 168 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 PPP1R7Q15435 360 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 ELAVL1Q15717 326 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 C18orf21Q32NC0 220 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 HP1BP3Q5SSJ5 553 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 FAM45BPQ6NSW5 357 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 IL20RBQ6UXL0 311 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 B3GNT6Q6ZMB0 384 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 SLCO4C1Q6ZQN7 724 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 YTHDF3Q7Z739 585 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 CLNKQ7Z7G1 428 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 GPALPP1Q8IXQ4 340 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 ZNF595Q8IYB9 648 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 KLHDC8AQ8IYD2 350 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 ULK2Q8IYT8 1036 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 FAM45AQ8TCE6 357 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 GRK7Q8WTQ7 553 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 ASB15Q8WXK1 588 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 ZNF592Q92610 1267 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 MS4A6EQ96DS6 147 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 CFAP36Q96G28 342 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 FAR2Q96K12 515 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 QRFPRQ96P65 431 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 RASL10BQ96S79 203 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 SMC6Q96SB8 1091 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 CSF3RQ99062 836 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 BDH2Q9BUT1 245 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 NPLQ9BXD5 320 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 TTTY12Q9BZ98 90 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 HPF1Q9NWY4 346 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 MYOTQ9UBF9 498 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 ASIC3Q9UHC3 531 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 PPP2R2CQ9Y2T4 447 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 JRKLQ9Y4A0 524 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 LIPGQ9Y5X9 500 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 PSAT1Q9Y617 370 aa8.72□□□□□ -1.01
SMARCE1-210ENST00000481231 GOLGA6L10A0A0M3HER8 536 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms