RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 FAM149AA5PLN7 773 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 CCT8L1PA6NM43 557 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 CYR61O00622 381 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 NTRK1P04629 796 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 NR2F6P10588 404 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 CPN2P22792 545 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 OR1D4P47884 311 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 POLR2JP52435 117 aaKnown RBP13.27□□□□□ -0.29
SHMT2-203ENST00000449049 SHC2P98077 582 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 DPY19L1Q2PZI1 675 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 C1orf189Q5VU69 101 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 BLOC1S3Q6QNY0 202 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 R3HCC1LQ7Z5L2 792 aaKnown RBP13.27□□□□□ -0.29
SHMT2-203ENST00000449049 NUDT8Q8WV74 236 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-203ENST00000449049 CSF3RQ99062 836 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 B3GNT4Q9C0J1 378 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 SLC52A3Q9NQ40 469 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 EHD3Q9NZN3 535 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 MAP4K5Q9Y4K4 846 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 MAU2Q9Y6X3 613 aa13.27□□□□□ -0.29
SHMT2-203ENST00000449049 SPEGQ15772 3267 aa13.26□□□□□ -0.29
SHMT2-203ENST00000449049 C9orf172C9J069 976 aa13.26□□□□□ -0.29
SHMT2-203ENST00000449049 C9JVG2 144 aa13.26□□□□□ -0.29
SHMT2-203ENST00000449049 PRKRAO75569 313 aaKnown RBP13.26□□□□□ -0.29
SHMT2-203ENST00000449049 KIAA0754O94854 1291 aa13.26□□□□□ -0.29
SHMT2-203ENST00000449049 RNH1P13489 461 aaKnown RBP13.26□□□□□ -0.29
SHMT2-203ENST00000449049 FBLP22087 321 aaKnown RBP13.26□□□□□ -0.29
SHMT2-203ENST00000449049 MAT1AQ00266 395 aaKnown RBP13.26□□□□□ -0.29
SHMT2-203ENST00000449049 KRT72Q14CN4 511 aa13.26□□□□□ -0.29
SHMT2-203ENST00000449049 SYT16Q17RD7 645 aa13.26□□□□□ -0.29
SHMT2-203ENST00000449049 C18orf63Q68DL7 685 aa13.26□□□□□ -0.29
SHMT2-203ENST00000449049 GK5Q6ZS86 529 aa13.26□□□□□ -0.29
SHMT2-203ENST00000449049 MED25Q71SY5 747 aa13.26□□□□□ -0.29
SHMT2-203ENST00000449049 DSELQ8IZU8 1212 aa13.26□□□□□ -0.29
SHMT2-203ENST00000449049 OR51Q1Q8NH59 317 aa13.26□□□□□ -0.29
SHMT2-203ENST00000449049 TSPEARQ8WU66 669 aa13.26□□□□□ -0.29
SHMT2-203ENST00000449049 ULBP3Q9BZM4 244 aa13.26□□□□□ -0.29
SHMT2-203ENST00000449049 SCN3AQ9NY46 2000 aa13.26□□□□□ -0.29
SHMT2-203ENST00000449049 GABRR3A8MPY1 467 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 PIM1P11309 404 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-203ENST00000449049 COX7A2P14406 83 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 PRDX6P30041 224 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 TLX1P31314 330 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-203ENST00000449049 ABHD18Q0P651 414 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 MAPRE2Q15555 327 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 SPANXN4Q5MJ08 99 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 SLC48A1Q6P1K1 146 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 COX15Q7KZN9 410 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 OR7A2PQ8NGA2 310 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 COL26A1Q96A83 441 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 COQ8BQ96D53 544 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 RNF31Q96EP0 1072 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 PRPF18Q99633 342 aaKnown RBP13.25□□□□□ -0.29
SHMT2-203ENST00000449049 DPH2Q9BQC3 489 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-203ENST00000449049 MIEF1Q9NQG6 463 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 SLC22A11Q9NSA0 550 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 TAS2R7Q9NYW3 318 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 CES1P1Q9UKY3 287 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 DYTNA2CJ06 578 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 BLACEA4D250 179 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 NR5A2O00482 541 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 IL6P05231 212 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 IL10P22301 178 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 ALDH9A1P49189 494 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 KCNK10P57789 538 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 DCDP81605 110 aaKnown RBP13.25□□□□□ -0.29
SHMT2-203ENST00000449049 SRSF11Q05519 484 aaKnown RBP13.25□□□□□ -0.29
SHMT2-203ENST00000449049 PRSS53Q2L4Q9 553 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 FAM174BQ3ZCQ3 159 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 NKAIN1Q4KMZ8 207 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 ZNF385BQ569K4 471 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 ARHGAP40Q5TG30 622 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 OR52E8Q6IFG1 317 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 MARCH9Q86YJ5 346 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 TICAM1Q8IUC6 712 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 FAM47BQ8NA70 645 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 TMEM52Q8NDY8 209 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 OR8J2Q8NGG1 315 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 RP9Q8TA86 221 aaKnown RBP13.25□□□□□ -0.29
SHMT2-203ENST00000449049 UCN3Q969E3 161 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 PPCDCQ96CD2 204 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 SPDL1Q96EA4 605 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 PEX11GQ96HA9 241 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 OR1F2PQ96R84 312 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 SPRY4Q9C004 299 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 RPF2Q9H7B2 306 aaKnown RBP13.25□□□□□ -0.29
SHMT2-203ENST00000449049 POLR1BQ9H9Y6 1135 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 WDR41Q9HAD4 459 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 FAM186AA6NE01 2351 aa13.25□□□□□ -0.29
SHMT2-203ENST00000449049 KIF26BQ2KJY2 2108 aa13.24□□□□□ -0.29
SHMT2-203ENST00000449049 NUP210LQ5VU65 1888 aa13.24□□□□□ -0.29
SHMT2-203ENST00000449049 FAM227AF5H4B4 570 aa13.24□□□□□ -0.29
SHMT2-203ENST00000449049 MEN1O00255 615 aa13.24□□□□□ -0.29
SHMT2-203ENST00000449049 PGRMC2O15173 223 aa13.24□□□□□ -0.29
SHMT2-203ENST00000449049 DLGAP3O95886 979 aa13.24□□□□□ -0.29
SHMT2-203ENST00000449049 PGRP06401 933 aa13.24□□□□□ -0.29
SHMT2-203ENST00000449049 SNRPB2P08579 225 aaKnown RBP13.24□□□□□ -0.29
SHMT2-203ENST00000449049 COX4I1P13073 169 aa13.24□□□□□ -0.29
SHMT2-203ENST00000449049 DDX5P17844 614 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms