RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SLC38A9Q8NBW4 561 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 MNS1Q8NEH6 495 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 OR9A1PQ8NGU1 263 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 GABPB2Q8TAK5 448 aaPredicted RBP4.66□□□□□ -1.66
VPS41-205ENST00000414632 FAM45AQ8TCE6 357 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 CT55Q8WUE5 264 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 ANKRD49Q8WVL7 239 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 IPCEF1Q8WWN9 437 aaPredicted RBP4.66□□□□□ -1.66
VPS41-205ENST00000414632 N4BP2L2Q92802 583 aaPredicted RBP4.66□□□□□ -1.66
VPS41-205ENST00000414632 EXT2Q93063 718 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 MED8Q96G25 268 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 MPP4Q96JB8 637 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 VPS39Q96JC1 886 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 UBXN10Q96LJ8 280 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 TEFMQ96QE5 360 aaKnown RBP4.66□□□□□ -1.66
VPS41-205ENST00000414632 CCNL2Q96S94 520 aaPredicted RBP4.66□□□□□ -1.66
VPS41-205ENST00000414632 RBBP8Q99708 897 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 TUBB2BQ9BVA1 445 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 PITPNM3Q9BZ71 974 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 SPRTNQ9H040 489 aaPredicted RBP4.66□□□□□ -1.66
VPS41-205ENST00000414632 ATG10Q9H0Y0 220 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 CDC42EP4Q9H3Q1 356 aaKnown RBP4.66□□□□□ -1.66
VPS41-205ENST00000414632 PRORYQ9H606 182 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 FANCEQ9HB96 536 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 GPR35Q9HC97 309 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 PDE7BQ9NP56 450 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 ZFP64Q9NPA5 681 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 FAM114A2Q9NRY5 505 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 UTP6Q9NYH9 597 aaKnown RBP4.66□□□□□ -1.66
VPS41-205ENST00000414632 TAS2R13Q9NYV9 303 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 NINJ2Q9NZG7 142 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 OR6C2Q9NZP2 312 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 NTMQ9P121 344 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 SEMA5BQ9P283 1151 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 STOX2Q9P2F5 926 aaPredicted RBP4.66□□□□□ -1.66
VPS41-205ENST00000414632 TAC3Q9UHF0 121 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 IL17BQ9UHF5 180 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 PILRAQ9UKJ1 303 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 NFU1Q9UMS0 254 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 SH2B3Q9UQQ2 575 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 BTRCQ9Y297 605 aa4.66□□□□□ -1.66
VPS41-205ENST00000414632 MTO1Q9Y2Z2 717 aaKnown RBP4.66□□□□□ -1.66
VPS41-205ENST00000414632 CFAP46Q8IYW2 2715 aa4.65□□□□□ -1.66
VPS41-205ENST00000414632 A0A0J9YVX5 310 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 UBE2QL1A1L167 161 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 MBD3L4A6NDZ8 208 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 MBD3L3A6NE82 208 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 NCF1BA6NI72 391 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 FAM159BA6NKW6 160 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 AQP12BA6NM10 295 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 NCF1CA8MVU1 366 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 CDC7O00311 574 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 SYT5O00445 386 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 NKX2-8O15522 239 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 ZNF749O43361 778 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 ZBTB14O43829 449 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 PRICKLE3O43900 615 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 CTSVO60911 334 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 OR2B3O76000 313 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 TSPAN12O95859 305 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 C1QAP02745 245 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 EIF2S1P05198 315 aaKnown RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 CBSLP0DN79 551 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 ENO3P13929 434 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 NCF1P14598 390 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 ZNF37AP17032 561 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 TCN2P20062 427 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 CYP2A7P20853 494 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 CD82P27701 267 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 IMPA1P29218 277 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 OAS2P29728 719 aaKnown RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 RPA3P35244 121 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 CBSP35520 551 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 RGS4P49798 205 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 SLC12A2P55011 1212 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 VSX2P58304 361 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 CLRN1P58418 232 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 RAP2BP61225 183 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 TBPL1P62380 186 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 POU6F2P78424 691 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 DUSP8Q13202 625 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 IL11RAQ14626 422 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 CYP2A13Q16696 494 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 C18orf21Q32NC0 220 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 PTCHD3Q3KNS1 767 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 FBXO48Q5FWF7 155 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 CRB2Q5IJ48 1285 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 TEX35Q5T0J7 233 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 UGT3A1Q6NUS8 523 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 FIGLAQ6QHK4 219 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 NEK10Q6ZWH5 1172 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 ADCK2Q7Z695 626 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 GALNT7Q86SF2 657 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 ADGRE4PQ86SQ3 457 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 SLC26A11Q86WA9 606 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 KMT5CQ86Y97 462 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 TMEM151BQ8IW70 566 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 CEP112Q8N8E3 955 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 OR2L3Q8NG85 312 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 OR2A1Q8NGT9 310 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms