RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 GPNMBQ14956 572 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 SF3A2Q15428 464 aaKnown RBP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 MAPK11Q15759 364 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 MICAQ29983 383 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 QRICH1Q2TAL8 776 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 CCDC14Q49A88 953 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 RFTN2Q52LD8 501 aaPredicted RBP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 ODF2Q5BJF6 829 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 PAGE2BQ5JRK9 111 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 C6orf136Q5SQH8 315 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 SLC22A10Q63ZE4 541 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 CYB5R2Q6BCY4 276 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 TCEAL6Q6IPX3 200 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 NEPROQ6NW34 567 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 C15orf52Q6ZUT6 534 aaKnown RBP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 DET1Q7L5Y6 550 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 COX8CQ7Z4L0 72 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 TMEM179BQ7Z7N9 219 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 SYVN1Q86TM6 617 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 PRUNE1Q86TP1 453 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 AMIGO1Q86WK6 493 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 SMAP1Q8IYB5 467 aaPredicted RBP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 ELMOD1Q8N336 334 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 ARL14Q8N4G2 192 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 TTC30BQ8N4P2 665 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 RNF182Q8N6D2 247 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 ARIH2OSQ8N7S6 290 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 DCAF4L2Q8NA75 395 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 OR10S1Q8NGN2 331 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 TEKT4Q8WW24 435 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 SMPDL3AQ92484 453 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 SECISBP2LQ93073 1101 aaKnown RBP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF622Q969S3 477 aaKnown RBP eCLIP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 OTUB1Q96FW1 271 aaPredicted RBP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF274Q96GC6 653 aaPredicted RBP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 MPP4Q96JB8 637 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 CDHR1Q96JP9 859 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 GDAP1L1Q96MZ0 367 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF830Q96NB3 372 aaPredicted RBP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 KIR2DL4Q99706 377 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 DPEP2Q9H4A9 486 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 RNF41Q9H4P4 317 aaPredicted RBP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 NOL11Q9H8H0 719 aaKnown RBP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 XAB2Q9HCS7 855 aaKnown RBP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 TIGARQ9NQ88 270 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 INPP5EQ9NRR6 644 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 OLA1Q9NTK5 396 aaKnown RBP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 MRGBPQ9NV56 204 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF446Q9NWS9 450 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 IMPAD1Q9NX62 359 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 CLIC5Q9NZA1 410 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 GDE1Q9NZC3 331 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 STOX2Q9P2F5 926 aaPredicted RBP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 CRNNQ9UBG3 495 aaPredicted RBP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 DDX25Q9UHL0 483 aaKnown RBP0.25□□□□□ -2.37
SNORD28-201ENST00000384706 CCPG1Q9ULG6 757 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 AGTPBP1Q9UPW5 1226 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 EXOC6BQ9Y2D4 811 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 CACNG2Q9Y698 323 aa0.25□□□□□ -2.37
SNORD28-201ENST00000384706 LTBP1Q14766 1721 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 IGLV8-61A0A075B6I0 122 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 TRBV6-6A0A0A6YYG2 114 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 A0A0U1RQS6 177 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 A0A1B0GVC2 190 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 PI4KAP2A4QPH2 592 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 TMEM150BA6NC51 233 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 SYNDIG1LA6NDD5 238 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 TRABD2BA6NFA1 517 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 PCNX2A6NKB5 2137 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 RNF212BA8MTL3 300 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF732B4DXR9 585 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 TMX2-CTNND1H3BSU7 103 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 K7ERI5 159 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 DLGAP1O14490 977 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 CLDN4O14493 209 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 PTGESO14684 152 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 PGRMC2O15173 223 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 B4GAT1O43505 415 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 NUDT21O43809 227 aaKnown RBP0.24□□□□□ -2.37
SNORD28-201ENST00000384706 USO1O60763 962 aaKnown RBP0.24□□□□□ -2.37
SNORD28-201ENST00000384706 B4GALT2O60909 372 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 RTN2O75298 545 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 MED6O75586 246 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 WDHD1O75717 1129 aaPredicted RBP0.24□□□□□ -2.37
SNORD28-201ENST00000384706 SERF1AO75920 110 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 UFL1O94874 794 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 SCGB1D1O95968 90 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 HPNP05981 417 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 ATP5BP06576 529 aaKnown RBP0.24□□□□□ -2.37
SNORD28-201ENST00000384706 SP9P0CG40 484 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 EPORP19235 508 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 SAT1P21673 171 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 IDSP22304 550 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 CALML3P27482 149 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 IL2RGP31785 369 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 MAN1A1P33908 653 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 PCGF2P35227 344 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 PSMB10P40306 273 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 SLC1A3P43003 542 aa0.24□□□□□ -2.37
SNORD28-201ENST00000384706 NT5C2P49902 561 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms