RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ZCCHC10Q8TBK6 192 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 IMP4Q96G21 291 aaKnown RBP15.45■□□□□ 0.06
NPHP3-201ENST00000337331 ABCG5Q9H222 651 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 LOC105369274A0A096LPK9 316 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 ZCWPW2A0A1B0GU75 182 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 MTMR11A4FU01 709 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 CA12O43570 354 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 GSRP00390 522 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 EDNRBP24530 442 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 GMFBP60983 142 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 UNC50Q53HI1 259 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 TPGS2Q68CL5 300 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 GDPD4Q6W3E5 623 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 ZNF782Q6ZMW2 699 aaPredicted RBP15.45■□□□□ 0.06
NPHP3-201ENST00000337331 LAX1Q8IWV1 398 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 SLC22A15Q8IZD6 547 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 OR4N4Q8N0Y3 316 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 RTP4Q96DX8 246 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 C12orf66Q96MD2 445 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 MRM3Q9HC36 420 aaKnown RBP15.45■□□□□ 0.06
NPHP3-201ENST00000337331 MARCH4Q9P2E8 410 aaPredicted RBP15.45■□□□□ 0.06
NPHP3-201ENST00000337331 OR1I1O60431 355 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 FGF19O95750 216 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 ZNF250P15622 560 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 PFKLP17858 780 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 MAT2AP31153 395 aaKnown RBP15.45■□□□□ 0.06
NPHP3-201ENST00000337331 MAN2A2P49641 1150 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 RGS6P49758 472 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 GPR85P60893 370 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 ERVK-25P63136 954 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 MAD2L1BPQ15013 274 aaPredicted RBP15.45■□□□□ 0.06
NPHP3-201ENST00000337331 ARSIQ5FYB1 569 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 C22orf42Q6IC83 251 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 OR8K5Q8NH50 307 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 KLK6Q92876 244 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 HTATIP2Q9BUP3 242 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 NIPAL2Q9H841 368 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 CTRB1P17538 263 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 CSTF2P33240 577 aaKnown RBP eCLIP15.44■□□□□ 0.06
NPHP3-201ENST00000337331 ISL1P61371 349 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 CTRB2Q6GPI1 263 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 TPRG1Q6ZUI0 275 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 SNX33Q8WV41 574 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 SLC29A3Q9BZD2 475 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 ELL3Q9HB65 397 aaPredicted RBP15.44■□□□□ 0.06
NPHP3-201ENST00000337331 WASH6PQ9NQA3 447 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 NANSQ9NR45 359 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 GBAP04062 536 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 INHAP05111 366 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 SLC35G6P0C7Q6 338 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 EBLN1P0CF75 366 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 ARSDP51689 593 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 FOXA1P55317 472 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 ERVK-21P61565 698 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 LRRC70Q7Z2Q7 622 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 CCDC36Q8IYA8 594 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 LILRB1Q8NHL6 650 aaPredicted RBP15.44■□□□□ 0.06
NPHP3-201ENST00000337331 RBPMSQ93062 196 aaKnown RBP15.44■□□□□ 0.06
NPHP3-201ENST00000337331 YIPF4Q9BSR8 244 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 GALNT9Q9HCQ5 603 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 ADAP2Q9NPF8 381 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 SDR39U1Q9NRG7 319 aaPredicted RBP15.44■□□□□ 0.06
NPHP3-201ENST00000337331 SLC39A1Q9NY26 324 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 ACSL5Q9ULC5 683 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 Q9Y3F1 56 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 RIIAD1A6NNX1 92 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 APODP05090 189 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 IGFBP4P22692 258 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 CMPK1P30085 196 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 SLC6A4P31645 630 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 MNDAP41218 407 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 TOMM20Q15388 145 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 ZNF280BQ86YH2 543 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 GJD3Q8N144 294 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 ZNF563Q8TA94 476 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 ARMC5Q96C12 935 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 ST6GAL2Q96JF0 529 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 ZNF514Q96K75 400 aaPredicted RBP15.44■□□□□ 0.06
NPHP3-201ENST00000337331 LMLNQ96KR4 655 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 PAAF1Q9BRP4 392 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 RHNO1Q9BSD3 238 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 RC3H2Q9HBD1 1191 aaKnown RBP15.44■□□□□ 0.06
NPHP3-201ENST00000337331 REV1Q9UBZ9 1251 aa15.44■□□□□ 0.06
NPHP3-201ENST00000337331 IGKV6D-21A0A0A0MT36 114 aa15.43■□□□□ 0.06
NPHP3-201ENST00000337331 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
NPHP3-201ENST00000337331 GGT1P19440 569 aa15.43■□□□□ 0.06
NPHP3-201ENST00000337331 PVALBP20472 110 aaPredicted RBP15.43■□□□□ 0.06
NPHP3-201ENST00000337331 GKP32189 559 aa15.43■□□□□ 0.06
NPHP3-201ENST00000337331 CDK6Q00534 326 aa15.43■□□□□ 0.06
NPHP3-201ENST00000337331 PROX2Q3B8N5 592 aa15.43■□□□□ 0.06
NPHP3-201ENST00000337331 OAFQ86UD1 273 aa15.43■□□□□ 0.06
NPHP3-201ENST00000337331 FAM129CQ86XR2 697 aa15.43■□□□□ 0.06
NPHP3-201ENST00000337331 UMODL1-AS1Q8N2C9 162 aa15.43■□□□□ 0.06
NPHP3-201ENST00000337331 FOLH1BQ9HBA9 442 aa15.43■□□□□ 0.06
NPHP3-201ENST00000337331 RPL36Q9Y3U8 105 aaKnown RBP15.43■□□□□ 0.06
NPHP3-201ENST00000337331 FXYD6-FXYD2A0A087WZ82 144 aa15.43■□□□□ 0.06
NPHP3-201ENST00000337331 H7C0S8 307 aa15.43■□□□□ 0.06
NPHP3-201ENST00000337331 MAFKO60675 156 aa15.43■□□□□ 0.06
NPHP3-201ENST00000337331 S1PR4O95977 384 aa15.43■□□□□ 0.06
NPHP3-201ENST00000337331 KLK1P06870 262 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms